RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CDH6P55285 790 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TAS2R40P59535 323 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SRP54P61011 504 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GABREP78334 506 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IHHQ14623 411 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PTPRRQ15256 657 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ISXQ2M1V0 245 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ASTE1Q2TB18 679 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CCDC122Q5T0U0 273 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FAXCQ5TGI0 409 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ALG1LQ6GMV1 187 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TEX26Q8N6G2 289 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 OR1E3Q8WZA6 343 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FAF2Q96CS3 445 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MCCC1Q96RQ3 725 aaPredicted RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RBM15Q96T37 977 aaKnown RBP eCLIP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DNAJC7Q99615 494 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ZNF670Q9BS34 389 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LGR4Q9BXB1 951 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ASCL3Q9NQ33 180 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MRPL40Q9NQ50 206 aaKnown RBP11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 EVA1BQ9NVM1 165 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 KLQ9UEF7 1012 aa11.25□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CPED1A4D0V7 1026 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 A8MX80 341 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 USP12O75317 370 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PROSCO94903 275 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HEXIM1O94992 359 aaKnown RBP11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MAP3K6O95382 1288 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SOD1P00441 154 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ANXA6P08133 673 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ALPIP09923 528 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HTR1BP28222 390 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 VIPR1P32241 457 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GJC1P36383 396 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TRIM23P36406 574 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GARSP41250 739 aaKnown RBP11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 BLKP51451 505 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 KRT81Q14533 505 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PAFAH1B3Q15102 231 aaKnown RBP11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ELOCQ15369 112 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SLC18A3Q16572 532 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ATP13A4Q4VNC1 1196 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ENPP7Q6UWV6 458 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HSD11B1LQ7Z5J1 315 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TSPAN33Q86UF1 283 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SFTPA2Q8IWL1 248 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NAT6Q93015 286 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NUS1Q96E22 293 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 DTD2Q96FN9 168 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ATXN7L3BQ96GX2 97 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HIC2Q96JB3 615 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SMIM14Q96QK8 99 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CCDC3Q9BQI4 270 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 WDR26Q9H7D7 661 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SIRPGQ9P1W8 387 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 UVRAGQ9P2Y5 699 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ENTPD2Q9Y5L3 495 aa11.24□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SDK2Q58EX2 2172 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 A0A0U1RQS6 177 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MYO1FO00160 1098 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NTN3O00634 580 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FZD6O60353 706 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MFAP3LO75121 409 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TCEA3O75764 348 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PGLSO95336 258 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PDHA1P08559 390 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MYCLP1P12525 358 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MAN1A1P33908 653 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 ETV3P41162 512 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 POLR2LP62875 67 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 GBE1Q04446 702 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 TLE3Q04726 772 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NFKBIBQ15653 356 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SOWAHCQ53LP3 525 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 C3orf38Q5JPI3 329 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RALGPS1Q5JS13 557 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MARC1Q5VT66 337 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LVRNQ6Q4G3 990 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 IGF2-ASQ6U949 168 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RBM44Q6ZP01 1051 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 RD3Q7Z3Z2 195 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 B3GNT8Q7Z7M8 397 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CBARPQ8N350 705 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PQLC3Q8N755 202 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 OR56A4Q8NGH8 313 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PDCD6IPQ8WUM4 868 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 LRRN4Q8WUT4 740 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PTCD2Q8WV60 388 aaKnown RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 MAML1Q92585 1016 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 FATE1Q969F0 183 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 CCDC74AQ96AQ1 378 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PRR11Q96HE9 360 aaPredicted RBP11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 POLR1BQ9H9Y6 1135 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 NT5MQ9NPB1 228 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 PADI4Q9UM07 663 aa11.23□□□□□ -0.61
RAB11FIP3-210ENST00000487899 SATB2Q9UPW6 733 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms