RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 DSELQ8IZU8 1212 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 ANKRD52Q8NB46 1076 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM116Q8NCL8 245 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 ENGASEQ8NFI3 743 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SCFD2Q8WU76 684 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 MSI2Q96DH6 328 aaKnown RBP3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SDF4Q9BRK5 362 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 STRA6Q9BX79 667 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 POLDIP3Q9BY77 421 aaKnown RBP3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SMARCAD1Q9H4L7 1026 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 MAGEE1Q9HCI5 957 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 CYSLTR2Q9NS75 346 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SLC6A13Q9NSD5 602 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM51Q9NW97 253 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 NSMCE4AQ9NXX6 385 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 PLK2Q9NYY3 685 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 CISD1Q9NZ45 108 aaKnown RBP3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SWAP70Q9UH65 585 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 A0A0U1RQF3 1178 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 A0A1W2PQM1 296 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 OR6C75A6NL08 312 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 TAF4O00268 1085 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 LDLRAD4O15165 306 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 SPRY3O43610 288 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 USO1O60763 962 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 RGS11O94810 467 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 EIF2S1P05198 315 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 MMP2P08253 660 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZNF182P17025 639 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 DDX5P17844 614 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 HOXD3P31249 432 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 RPL3P39023 403 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 MLH1P40692 756 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 PIK3CAP42336 1068 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 RFX2P48378 723 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 NUDT6P53370 316 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 DRG2P55039 364 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 P2RX3P56373 397 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZBED6P86452 979 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 PKP1Q13835 747 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 SHBQ15464 509 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZSCAN23Q3MJ62 389 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 EFHC1Q5JVL4 640 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 GFI1BQ5VTD9 330 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 SPATA1Q5VX52 437 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 NUGGCQ68CJ6 796 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 LRRC8EQ6NSJ5 796 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 IKBIPQ70UQ0 350 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 LINGO2Q7L985 606 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMTC2Q8N394 836 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 OR14A16Q8NHC5 309 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 KCNG4Q8TDN1 519 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 NR4A3Q92570 626 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 APOLD1Q96LR9 279 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 SLITRK1Q96PX8 696 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM47Q9BQJ4 181 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 CHCHD6Q9BRQ6 235 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 DCLK3Q9C098 648 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 KIF9Q9HAQ2 790 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 BLOC1S4Q9NUP1 217 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 INTS6Q9UL03 887 aaKnown RBP3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 MKLN1Q9UL63 735 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 SESN1Q9Y6P5 492 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 MAU2Q9Y6X3 613 aa3.86□□□□□ -1.79
HMGB1P36-201ENST00000487709 FAM237BA0A1B0GVD1 139 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 LIPT2A6NK58 231 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 NPIPB11E5RHQ5 1161 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 PAGE4O60829 102 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 SEC31AO94979 1220 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 ALOX12P18054 663 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 GNLYP22749 145 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 C21orf33P30042 268 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 SORDQ00796 357 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 NIPAL4Q0D2K0 466 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 FGFBP1Q14512 234 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 HLFQ16534 295 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 KRT24Q2M2I5 525 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 USP41Q3LFD5 358 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 PPP6R3Q5H9R7 873 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 FNBP1LQ5T0N5 605 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 ASPHD1Q5U4P2 390 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 ZNF324BQ6AW86 544 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 CAPRIN2Q6IMN6 1127 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 TYW3Q6IPR3 259 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 METTL2BQ6P1Q9 378 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 CYP20A1Q6UW02 462 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 GSG1LQ6UXU4 331 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 CCDC129Q6ZRS4 1044 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 FASTKD5Q7L8L6 764 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 CTU1Q7Z7A3 348 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 ARHGAP12Q8IWW6 846 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 DHX40Q8IX18 779 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 HACE1Q8IYU2 909 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 AGBL3Q8NEM8 1001 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 HUS1BQ8NHY5 278 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 PSPC1Q8WXF1 523 aaKnown RBP3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 DNASE2BQ8WZ79 361 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 TRIB2Q92519 343 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 ARHGEF26Q96DR7 871 aa3.85□□□□□ -1.79
HMGB1P36-201ENST00000487709 METTL2AQ96IZ6 378 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms