RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 TFR2Q9UP52 801 aa20.49■□□□□ 0.87
HDAC4-209ENST00000487617 GCATO75600 419 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 HLA-DQB2P05538 268 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 PDHA1P08559 390 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 CKMT1AP12532 417 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 MYF5P13349 255 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 KRT10P13645 584 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 CTPS1P17812 591 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 HNF1BP35680 557 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 PPIDQ08752 370 aaKnown RBP20.48■□□□□ 0.87
HDAC4-209ENST00000487617 ARHGEF7Q14155 803 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 ALG11Q2TAA5 492 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 HES3Q5TGS1 186 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 ZCCHC8Q6NZY4 707 aaKnown RBP20.48■□□□□ 0.87
HDAC4-209ENST00000487617 NPNTQ6UXI9 565 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 NDUFAF2Q8N183 169 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 TPCN2Q8NHX9 752 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 NUS1Q96E22 293 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 TBATAQ96M53 351 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 COQ10AQ96MF6 247 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 WDR92Q96MX6 357 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 GOLPH3Q9H4A6 298 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 KLQ9UEF7 1012 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 ALG6Q9Y672 507 aa20.48■□□□□ 0.87
HDAC4-209ENST00000487617 TDRD6O60522 2096 aaKnown RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 ANKRD36A6QL64 1941 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 SHROOM3Q8TF72 1996 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 NPIPB15A6NHN6 443 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 SOWAHDA6NJG2 315 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 KCNK1O00180 336 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 CACNB4O00305 520 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 PSTPIP1O43586 416 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 RASGRP1O95267 797 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 JCHAINP01591 159 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 ANXA6P08133 673 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 DUSP3P51452 185 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 HK3P52790 923 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 EPHB1P54762 984 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 SRP54P61011 504 aaKnown RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 DYNLT1P63172 113 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 E2F1Q01094 437 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 AP1B1Q10567 949 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 PTPRRQ15256 657 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 MFSD7Q6UXD7 560 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 RD3Q7Z3Z2 195 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 TSPAN33Q86UF1 283 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 TMTC1Q8IUR5 882 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 ARRDC2Q8TBH0 407 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 MCCC1Q96RQ3 725 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 USP29Q9HBJ7 922 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 CHKBQ9Y259 395 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 PPIL1Q9Y3C6 166 aa20.47■□□□□ 0.87
HDAC4-209ENST00000487617 EPN1Q9Y6I3 576 aaPredicted RBP20.47■□□□□ 0.87
HDAC4-209ENST00000487617 A0A0A6YYK5 440 aaPredicted RBP20.46■□□□□ 0.87
HDAC4-209ENST00000487617 LY6G6EA0A0G2JKS1 128 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 LMO7DNF2Z398 122 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 TPP1O14773 563 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 FZD6O60353 706 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 NDUFA10O95299 355 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 IPO7O95373 1038 aaKnown RBP20.46■□□□□ 0.87
HDAC4-209ENST00000487617 ALPIP09923 528 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 CTSEP14091 401 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 TSHRP16473 764 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 CA4P22748 312 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 LHCGRP22888 699 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 KIAA1024LP59773 190 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 NIPAL4Q0D2K0 466 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 IHHQ14623 411 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 PDK1Q15118 436 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 ESRP1Q6NXG1 681 aaKnown RBP20.46■□□□□ 0.87
HDAC4-209ENST00000487617 PNCKQ6P2M8 343 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 HSD11B1LQ7Z5J1 315 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 FUBP1Q96AE4 644 aaKnown RBP20.46■□□□□ 0.87
HDAC4-209ENST00000487617 CLPBQ9H078 707 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 WDR26Q9H7D7 661 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 KCTD5Q9NXV2 234 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 SALL4Q9UJQ4 1053 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 DOLKQ9UPQ8 538 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 U3KQA8 63 aa20.46■□□□□ 0.87
HDAC4-209ENST00000487617 LRRK1Q38SD2 2015 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 TRABD2BA6NFA1 517 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 PSMD11O00231 422 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 PPP1R12AO14974 1030 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 FECHP22830 423 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 ETV3P41162 512 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 CDKN2BP42772 138 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 IFI35P80217 286 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 INSM1Q01101 510 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 ZBTB17Q13105 803 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 ELOCQ15369 112 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 NYAP1Q6ZVC0 841 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 PELI3Q8N2H9 469 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 CBARPQ8N350 705 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 FSTL5Q8N475 847 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 OR56A4Q8NGH8 313 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 DTD2Q96FN9 168 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 OLFM3Q96PB7 478 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 SMIM14Q96QK8 99 aa20.45■□□□□ 0.86
HDAC4-209ENST00000487617 TDRD1Q9BXT4 1180 aaKnown RBP20.45■□□□□ 0.86
HDAC4-209ENST00000487617 CCDC86Q9H6F5 360 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms