RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ELFN1P0C7U0 828 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 CCL4P13236 92 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 SERPINA4P29622 427 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 TRIM23P36406 574 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 ZNF143P52747 638 aaPredicted RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 MAZP56270 477 aaKnown RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 POLR2FP61218 127 aaKnown RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 TCP11X2Q5H9J9 407 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 COLEC12Q5KU26 742 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 TMEM164Q5U3C3 297 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 SRLQ86TD4 932 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 PIM3Q86V86 326 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 PELI3Q8N2H9 469 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 TSEN2Q8NCE0 465 aaKnown RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 KIAA1524Q8TCG1 905 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 JPH3Q8WXH2 748 aaPredicted RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 ECHDC3Q96DC8 303 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 CELF6Q96J87 481 aaKnown RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 SLC25A18Q9H1K4 315 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 WDR26Q9H7D7 661 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 ATP13A3Q9H7F0 1226 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 GEMIN8Q9NWZ8 242 aaKnown RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 AKAP7Q9P0M2 348 aaPredicted RBP19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 MOSPD1Q9UJG1 213 aa19.51■□□□□ 0.71
SMPDL3A-202ENST00000487215 TCRBV5S1A1TA0A578 114 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 PRSS38A1L453 326 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 SIGLEC16A6NMB1 481 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 EPHB6O15197 1021 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 CALB1P05937 261 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 EEF1GP26641 437 aaKnown RBP19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 CSNK1DP48730 415 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 NDST2P52849 883 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 AIF1P55008 147 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 OR1D5P58170 312 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 CLEC16AQ2KHT3 1053 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 AMZ1Q400G9 498 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 AFMIDQ63HM1 303 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 DPPA4Q7L190 304 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 ZNF438Q7Z4V0 828 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 C17orf82Q86X59 251 aaPredicted RBP19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 PHF13Q86YI8 300 aaPredicted RBP19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 NUDT22Q9BRQ3 303 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 NLRC4Q9NPP4 1024 aa19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 FAM207AQ9NSI2 230 aaPredicted RBP19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 SPATS2LQ9NUQ6 558 aaKnown RBP19.5■□□□□ 0.71
SMPDL3A-202ENST00000487215 UNC13CQ8NB66 2214 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 STMND1H3BQB6 276 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 STAT1P42224 750 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 PAPOLAP51003 745 aaKnown RBP19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 ARSDP51689 593 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 TPI1P60174 286 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 TLE1Q04724 770 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 TSR1Q2NL82 804 aaKnown RBP19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 PNCKQ6P2M8 343 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 DNAJC24Q6P3W2 148 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 ZNF574Q6ZN55 896 aaPredicted RBP19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 MON1BQ7L1V2 547 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 RCBTB1Q8NDN9 531 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 GPBAR1Q8TDU6 330 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 PMEPA1Q969W9 287 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 MCEEQ96PE7 176 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 SLC12A9Q9BXP2 914 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 SLC39A8Q9C0K1 460 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 CARS2Q9HA77 564 aaKnown RBP19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 DACH1Q9UI36 760 aa19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 TLN1Q9Y490 2541 aaKnown RBP19.49■□□□□ 0.71
SMPDL3A-202ENST00000487215 IGHV5-10-1A0A0J9YXX1 117 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 RHPN2P1A8MT19 583 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 A8MX80 341 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 HGSO14964 777 aaPredicted RBP19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 TEX33O43247 280 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 PALMO75781 387 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 CCNB1P14635 433 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 ALDH4A1P30038 563 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 RPL7AP62424 266 aaKnown RBP19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 BCL2L1Q07817 233 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 NR1D2Q14995 579 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 CLPPQ16740 277 aaPredicted RBP19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 NRROSQ86YC3 692 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 PAF1Q8N7H5 531 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 ZDHHC1Q8WTX9 485 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 NKD1Q969G9 470 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 CCDC74BQ96LY2 380 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 CINPQ9BW66 212 aaPredicted RBP19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 VPS16Q9H269 839 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 CLSTN2Q9H4D0 955 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 SUDS3Q9H7L9 328 aaPredicted RBP19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 GPATCH2LQ9NWQ4 482 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 DONSONQ9NYP3 566 aa19.48■□□□□ 0.71
SMPDL3A-202ENST00000487215 ARHGAP42A6NI28 874 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 PDE2AO00408 941 aaPredicted RBP19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 TRAFD1O14545 582 aaPredicted RBP19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 FGF1P05230 155 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 FGF3P11487 239 aaPredicted RBP19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 MYCLP1P12525 358 aaPredicted RBP19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 HTR7P34969 479 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 ATP1A2P50993 1020 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 POLR2LP62875 67 aaKnown RBP19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 ACOX1Q15067 660 aa19.47■□□□□ 0.71
SMPDL3A-202ENST00000487215 PPP1R15BQ5SWA1 713 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms