RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 COLEC12Q5KU26 742 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TRAPPC3LQ5T215 181 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 USP43Q70EL4 1123 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PDZD4Q76G19 769 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CUZD1Q86UP6 607 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 P2RY8Q86VZ1 359 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 DNAJB14Q8TBM8 379 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FAM149B1Q96BN6 582 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 NXNL1Q96CM4 212 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ZHX1-C8orf76Q96EF9 292 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PHF21BQ96EK2 531 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MCRS1Q96EZ8 462 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 IL12RB2Q99665 862 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ENPP5Q9UJA9 477 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CCNL1Q9UK58 526 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PCDHAC2Q9Y5I4 1007 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FOCADQ5VW36 1801 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SPDYE2BA6NHP3 402 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SAGE2PA6NJ88 616 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 HACD1B0YJ81 288 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 KCNK1O00180 336 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PPEF1O14829 653 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ARHGEF9O43307 516 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 HUS1O60921 280 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SUPT7LO94864 414 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SPDYE6P0CI01 402 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PCNAP12004 261 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ATP5F1P24539 256 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 OXTRP30559 389 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ST13P50502 369 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PGGT1BP53609 377 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 KCNK10P57789 538 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 PPP1R3AQ16821 1122 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SMU1Q2TAY7 513 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 SPDYE2Q495Y8 402 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 VPS26BQ4G0F5 336 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 XKR3Q5GH77 459 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TAS1R3Q7RTX0 852 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 FAM35AQ86V20 835 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ZDHHC13Q8IUH4 622 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MIER2Q8N344 545 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 RDM1Q8NG50 284 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 MFSD3Q96ES6 412 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TMEM176AQ96HP8 235 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CPB2Q96IY4 423 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 DMRTB1Q96MA1 342 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 HOXD1Q9GZZ0 328 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 DBNDD1Q9H9R9 158 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 RPRD1BQ9NQG5 326 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ACTR3BQ9P1U1 418 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 COL20A1Q9P218 1284 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TMEM181Q9P2C4 612 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TESMINQ9Y4I5 508 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 ANKRD12Q6UB98 2062 aa6.26□□□□□ -1.41
VPS13D-209ENST00000487188 GOLGB1Q14789 3259 aaKnown RBP6.26□□□□□ -1.41
VPS13D-209ENST00000487188 TCP10L2B9ZVM9 353 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 H0YAE9 185 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 NME4O00746 187 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 NPHS1O60500 1241 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 VDRP11473 427 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TSPAN8P19075 237 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TGM1P22735 817 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 RFC2P35250 354 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 POLR2IP36954 125 aaKnown RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 VBP1P61758 197 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TUBA1BP68363 451 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 CLDN10P78369 228 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 FCHO2Q0JRZ9 810 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 DAG1Q14118 895 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 ZNF460Q14592 562 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 CYBRD1Q53TN4 286 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 HABP4Q5JVS0 413 aaKnown RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 ZCCHC8Q6NZY4 707 aaKnown RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 NEK10Q6ZWH5 1172 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 CYP4V2Q6ZWL3 525 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TUBA1AQ71U36 451 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 RYBPQ8N488 228 aaPredicted RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 GIPC2Q8TF65 315 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TUBGCP3Q96CW5 907 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TXNDC15Q96J42 360 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 CEP295NLQ96MC4 621 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 YME1L1Q96TA2 773 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 MIR1-1HGQ9H1L0 117 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 TDRD3Q9H7E2 651 aaKnown RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 RPF1Q9H9Y2 349 aaKnown RBP6.25□□□□□ -1.41
VPS13D-209ENST00000487188 LRRC4Q9HBW1 653 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 AKIP1Q9NQ31 210 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 WDR70Q9NW82 654 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 ADPRHL2Q9NX46 363 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 SCN3BQ9NY72 215 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 FAM95CA0A1B0GW59 222 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 NEMP2A6NFY4 417 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 FAM25AB3EWG3 89 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 FAM25CB3EWG5 89 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 FAM25GB3EWG6 89 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 OGTO15294 1046 aa6.25□□□□□ -1.41
VPS13D-209ENST00000487188 MTSS1O43312 755 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms