RNA–Protein interactions for RNA: ENST00000487169.5

HDLBP-241, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 4,339 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-241ENST00000487169 SOHLH2Q9NX45 425 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 LEF1Q9UJU2 399 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-241ENST00000487169 DUSP12Q9UNI6 340 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 FAM47E-STBD1D6RA91 191 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 MT-CYBP00156 380 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-241ENST00000487169 CNPP09543 421 aaKnown RBP13.39□□□□□ -0.27
HDLBP-241ENST00000487169 PSMB9P28065 219 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 PTP4A2Q12974 167 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 USP39Q53GS9 565 aaKnown RBP13.39□□□□□ -0.27
HDLBP-241ENST00000487169 TAPT1Q6NXT6 567 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 GCNT7Q6ZNI0 430 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 GPR180Q86V85 440 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 SCAMP5Q8TAC9 235 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 SLC9A7Q96T83 725 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 RNF39Q9H2S5 420 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 PCDH12Q9NPG4 1184 aa13.39□□□□□ -0.27
HDLBP-241ENST00000487169 LINC00854A0A1B0GVQ3 168 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 LYPLA1O75608 230 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 FAM58BPP0C7Q3 252 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GRIA3P42263 894 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GPD2P43304 727 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 HNRNPDQ14103 355 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 OLFML2BQ68BL8 750 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ARHGAP17Q68EM7 881 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 TTC27Q6P3X3 843 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GET4Q7L5D6 327 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CLIP3Q96DZ5 547 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 AKAP7Q9P0M2 348 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SNX10Q9Y5X0 201 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ATXN2Q99700 1313 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 RGPD5Q99666 1765 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 BIRC5O15392 142 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 AP2A1O95782 977 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 C8AP07357 584 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CCNCP24863 283 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CXCR3P49682 368 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ATXN1P54253 815 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PSME3P61289 254 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CASP12Q6UXS9 341 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 BNIPLQ7Z465 357 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 LDB1Q86U70 411 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 RPTORQ8N122 1335 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PCDH19Q8TAB3 1148 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ASZ1Q8WWH4 475 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SH3GL3Q99963 347 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 TRMOQ9BU70 441 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 MAGEH1Q9H213 219 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 RAD21L1Q9H4I0 556 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 EPS8L2Q9H6S3 715 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 REEP1Q9H902 201 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 IMP3Q9NV31 184 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ANAPC2Q9UJX6 822 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 LRCH1Q9Y2L9 728 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CLUHO75153 1309 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CACNB4O00305 520 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 CCL22O00626 93 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PEX1O43933 1283 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 KCNH1O95259 989 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 EPHX1P07099 455 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PPIGQ13427 754 aaKnown RBP eCLIP13.38□□□□□ -0.274e-9■□□□□ 9.3
HDLBP-241ENST00000487169 FASTKD3Q14CZ7 662 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 RNASEH2BQ5TBB1 312 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 LRRC74BQ6ZQY2 392 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ZNF567Q8N184 647 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ZNF655Q8N720 491 aaPredicted RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 RDH11Q8TC12 318 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GMLQ99445 158 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SLC25A51Q9H1U9 297 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SEMA6AQ9H2E6 1030 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SRRDQ9UH36 339 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SLC27A6Q9Y2P4 619 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 ZNF536O15090 1300 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 M0R2N6 131 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 EDF1O60869 148 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 NFATC1O95644 943 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 COX4I1P13073 169 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 EPORP19235 508 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PAICSP22234 425 aaKnown RBP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 NAA20P61599 178 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 GNA13Q14344 377 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 TXNDC11Q6PKC3 985 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDLBP-241ENST00000487169 C9orf16Q9BUW7 83 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 FAIM2Q9BWQ8 316 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PHACTR1Q9C0D0 580 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
HDLBP-241ENST00000487169 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-241ENST00000487169 RPP40O75818 363 aaKnown RBP13.37□□□□□ -0.27
HDLBP-241ENST00000487169 FAM155BO75949 473 aa13.37□□□□□ -0.27
HDLBP-241ENST00000487169 VNN1O95497 513 aa13.37□□□□□ -0.27
HDLBP-241ENST00000487169 IFNA16P05015 189 aa13.37□□□□□ -0.27
HDLBP-241ENST00000487169 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-241ENST00000487169 UNGP13051 313 aaPredicted RBP13.37□□□□□ -0.27
HDLBP-241ENST00000487169 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms