RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SARM1Q6SZW1 724 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 TRILQ7L0X0 811 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 TRAPPC11Q7Z392 1133 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 ARHGAP12Q8IWW6 846 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 NME8Q8N427 588 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 ZCCHC9Q8N567 271 aaKnown RBP3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 WDTC1Q8N5D0 677 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 TEX45Q8NA69 505 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 TMEM163Q8TC26 289 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 SLC35F5Q8WV83 523 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 SNAPC3Q92966 411 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 NSUN4Q96CB9 384 aaKnown RBP3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 FBXL8Q96CD0 374 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 MMABQ96EY8 250 aaPredicted RBP3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 WDFY2Q96P53 400 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 NPFFR1Q9GZQ6 430 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 CCDC68Q9H2F9 335 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 KAT14Q9H8E8 782 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 MRPL44Q9H9J2 332 aaKnown RBP3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 POLR1BQ9H9Y6 1135 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 KIF9Q9HAQ2 790 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 BPIFA1Q9NP55 256 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 SMYD2Q9NRG4 433 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 PLK2Q9NYY3 685 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 DLGAP2Q9P1A6 1054 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 ABI3Q9P2A4 366 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 RABGAP1Q9Y3P9 1069 aa3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 LSM4Q9Y4Z0 139 aaKnown RBP3.66□□□□□ -1.82
SNRNP27-204ENST00000487029 RSF1Q96T23 1441 aaPredicted RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 TMEM272A0A1B0GTI8 110 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 CHL1O00533 1208 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 VILLO15195 856 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 MTA2O94776 668 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 EPN2O95208 641 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 IPO7O95373 1038 aaKnown RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 HSP90AA1P07900 732 aaKnown RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 RARGP13631 454 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ETFAP13804 333 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ITGAXP20702 1163 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 PSMB10P40306 273 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 HADHAP40939 763 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 PRAMEP78395 509 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 MC1RQ01726 317 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ITGADQ13349 1161 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ACVR2BQ13705 512 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 CRYMQ14894 314 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ARHGEF6Q15052 776 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 TOMM20Q15388 145 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 SHBQ15464 509 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 DUSP6Q16828 381 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 SOWAHAQ2M3V2 549 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 COL28A1Q2UY09 1125 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 DCAF6Q58WW2 860 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 KLHL35Q6PF15 583 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 PARM1Q6UWI2 310 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 LCTLQ6UWM7 567 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC16A12Q6ZSM3 486 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 PATL1Q86TB9 770 aaKnown RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 NOXA1Q86UR1 476 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 SFTPA2Q8IWL1 248 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 CCDC89Q8N998 374 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 ENGASEQ8NFI3 743 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 GABPB2Q8TAK5 448 aaPredicted RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 WFIKKN2Q8TEU8 576 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 LPAR1Q92633 364 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 FAM120BQ96EK7 910 aaKnown RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 CMTM3Q96MX0 182 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 NUDT16L1Q9BRJ7 211 aaKnown RBP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 FTOQ9C0B1 505 aaKnown RBP eCLIP3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 SH2D4AQ9H788 454 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 MAGEE1Q9HCI5 957 aa3.65□□□□□ -1.83
SNRNP27-204ENST00000487029 IGLV5-39A0A0G2JS06 123 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 FRMD3A2A2Y4 597 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 AGAP14A8MT82 685 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 TSPAN9O75954 239 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 MMP2P08253 660 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 AGAP20933 346 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 MYF6P23409 242 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SHMT1P34896 483 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 F2RL1P55085 397 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 NLRP5P59047 1200 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SELENOVP59797 346 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 CREB5Q02930 508 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 CHAF1BQ13112 559 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 KCTD2Q14681 263 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 DRAP1Q14919 205 aaPredicted RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 WTAPQ15007 396 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 ASIC2Q16515 512 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 DUSP28Q4G0W2 176 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 RILPL1Q5EBL4 403 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 GFI1BQ5VTD9 330 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 NUGGCQ68CJ6 796 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 C16orf54Q6UWD8 224 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 PALB2Q86YC2 1186 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 ADGRF2Q8IZF7 708 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 PARP16Q8N5Y8 322 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 INPP5DQ92835 1189 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 SLC25A28Q96A46 364 aa3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 FAM84BQ96KN1 310 aaPredicted RBP3.64□□□□□ -1.83
SNRNP27-204ENST00000487029 C1orf74Q96LT6 269 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms