RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SYN2Q92777 582 aaPredicted RBP24.63■■□□□ 1.53
LIME1-206ENST00000487026 CCDC74AQ96AQ1 378 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 LGR4Q9BXB1 951 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 NOD2Q9HC29 1040 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 FGF22Q9HCT0 170 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 ASCL3Q9NQ33 180 aa24.63■■□□□ 1.53
LIME1-206ENST00000487026 TCEA3O75764 348 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 CR2P20023 1033 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 MAXP61244 160 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 SLC25A11Q02978 314 aaKnown RBP24.62■■□□□ 1.53
LIME1-206ENST00000487026 PTPRRQ15256 657 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 DENND2CQ68D51 928 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 OR56A4Q8NGH8 313 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 NUDCD1Q96RS6 583 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 RBM15Q96T37 977 aaKnown RBP eCLIP24.62■■□□□ 1.53
LIME1-206ENST00000487026 IP6K2Q9UHH9 426 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 CAPN11Q9UMQ6 739 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 DGKBQ9Y6T7 804 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 LRP4O75096 1905 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 SHROOM3Q8TF72 1996 aa24.62■■□□□ 1.53
LIME1-206ENST00000487026 EIF4E1BA6NMX2 242 aaKnown RBP24.61■■□□□ 1.53
LIME1-206ENST00000487026 HTRA2O43464 458 aaPredicted RBP24.61■■□□□ 1.53
LIME1-206ENST00000487026 CYP1A2P05177 515 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 SSR1P43307 286 aaKnown RBP24.61■■□□□ 1.53
LIME1-206ENST00000487026 PDX1P52945 283 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 KIAA1024LP59773 190 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 ERVPABLB-1P60509 514 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 CXADRP78310 365 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 ZBED6P86452 979 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 TRAF2Q12933 501 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 MMRN1Q13201 1228 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 SPIDRQ14159 915 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 PNCKQ6P2M8 343 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 SFTPA2Q8IWL1 248 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 ATPAF2Q8N5M1 289 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 NIPA2Q8N8Q9 360 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 TEKT4Q8WW24 435 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 PRR11Q96HE9 360 aaPredicted RBP24.61■■□□□ 1.53
LIME1-206ENST00000487026 COQ10AQ96MF6 247 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 UBL7Q96S82 380 aaPredicted RBP24.61■■□□□ 1.53
LIME1-206ENST00000487026 MOSPD1Q9UJG1 213 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 KIF26BQ2KJY2 2108 aa24.61■■□□□ 1.53
LIME1-206ENST00000487026 NTN3O00634 580 aaPredicted RBP24.6■■□□□ 1.53
LIME1-206ENST00000487026 CPP00450 1065 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CD48P09326 243 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 IL4RP24394 825 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 RBMS1P29558 406 aaKnown RBP24.6■■□□□ 1.53
LIME1-206ENST00000487026 TRIM23P36406 574 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CDH6P55285 790 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CCL7P80098 99 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 KRT81Q14533 505 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CNGA3Q16281 694 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CCDC122Q5T0U0 273 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 TAF8Q7Z7C8 310 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CPNE8Q86YQ8 564 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 SDR16C5Q8N3Y7 309 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 GRAMD1AQ96CP6 724 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 SLC46A1Q96NT5 459 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 MGME1Q9BQP7 344 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 TMEM168Q9H0V1 697 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 CYP4F12Q9HCS2 524 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 THSD1Q9NS62 852 aa24.6■■□□□ 1.53
LIME1-206ENST00000487026 LUC7L2Q9Y383 392 aaKnown RBP24.6■■□□□ 1.53
LIME1-206ENST00000487026 SOCS5O75159 536 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 PRB1P04280 392 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 HSPA9P38646 679 aaKnown RBP24.59■■□□□ 1.53
LIME1-206ENST00000487026 MMP13P45452 471 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 ATP13A4Q4VNC1 1196 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 MARC1Q5VT66 337 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 ALKBH5Q6P6C2 394 aaKnown RBP24.59■■□□□ 1.53
LIME1-206ENST00000487026 GPR155Q7Z3F1 870 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 FAM46DQ8NEK8 389 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 CCL4L1Q8NHW4 92 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 WDR48Q8TAF3 677 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 NUS1Q96E22 293 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 WDR26Q9H7D7 661 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 SUDS3Q9H7L9 328 aaPredicted RBP24.59■■□□□ 1.53
LIME1-206ENST00000487026 IFNKQ9P0W0 207 aa24.59■■□□□ 1.53
LIME1-206ENST00000487026 A0A0U1RQS6 177 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 MYO1FO00160 1098 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 HOXC4P09017 264 aaPredicted RBP24.58■■□□□ 1.53
LIME1-206ENST00000487026 VIPR1P32241 457 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 GJC1P36383 396 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 ETV3P41162 512 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 HSD11B1LQ7Z5J1 315 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 B3GNT8Q7Z7M8 397 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 BBS5Q8N3I7 341 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 Q8N9G6 341 aaPredicted RBP24.58■■□□□ 1.53
LIME1-206ENST00000487026 GPR156Q8NFN8 814 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 NSMCE1Q8WV22 266 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 KCNE4Q8WWG9 221 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 SPOCK2Q92563 424 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 GFM1Q96RP9 751 aaKnown RBP24.58■■□□□ 1.53
LIME1-206ENST00000487026 CPNE5Q9HCH3 593 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 NT5MQ9NPB1 228 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 PHTF1Q9UMS5 762 aa24.58■■□□□ 1.53
LIME1-206ENST00000487026 A0A1W2PQM1 296 aa24.57■■□□□ 1.52
LIME1-206ENST00000487026 GOLGA6L19H0YKK7 550 aa24.57■■□□□ 1.52
LIME1-206ENST00000487026 TNFRSF10CO14798 259 aa24.57■■□□□ 1.52
LIME1-206ENST00000487026 KLK10O43240 276 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms