RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 PCDHB10Q9UN67 800 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ERVW-1Q9UQF0 538 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 CSNK1G3Q9Y6M4 447 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 PMF1-BGLAPU3KQ54 211 aa6.76□□□□□ -1.33
SMC4-217ENST00000485867 ZNF106Q9H2Y7 1883 aaKnown RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 OTOGQ6ZRI0 2925 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 PRAMEF33A0A0G2JMD5 474 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 A0A1B0GTL3 188 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 A1L4Q6 167 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 FRMD3A2A2Y4 597 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 STX6O43752 255 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 PRAMEF10O60809 474 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 TBL1XO60907 577 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 CLSTN1O94985 981 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 SRPRAP08240 638 aaKnown RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 AKT2P31751 481 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 HOXD13P35453 343 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 DCTP40126 519 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 UQCRFS1P47985 274 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 CLDN2P57739 230 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 TAS2R38P59533 333 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 YWHAGP61981 247 aaKnown RBP eCLIP6.75□□□□□ -1.33
SMC4-217ENST00000485867 CNTN1Q12860 1018 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 DEFB133Q30KQ1 61 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 TMCO4Q5TGY1 634 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 PIK3R6Q5UE93 754 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 RFWD3Q6PCD5 774 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 GCNT7Q6ZNI0 430 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 ABI3BPQ7Z7G0 1075 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 UNC93AQ86WB7 457 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 MFN1Q8IWA4 741 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 SLC35F3Q8IY50 421 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 ARHGAP18Q8N392 663 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 C9orf43Q8TAL5 461 aaPredicted RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 FIBINQ8TAL6 211 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 KLHL6Q8WZ60 621 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 KLK6Q92876 244 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 CYFIP2Q96F07 1278 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 TSPAN17Q96FV3 270 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 SPATA32Q96LK8 384 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 TWNKQ96RR1 684 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 CCDC3Q9BQI4 270 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 PREBQ9HCU5 417 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 ZNF71Q9NQZ8 489 aaPredicted RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 GPR27Q9NS67 375 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 FOXJ2Q9P0K8 574 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 CGGBP1Q9UFW8 167 aaPredicted RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 SLCO3A1Q9UIG8 710 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 SARDHQ9UL12 918 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 EFR3BQ9Y2G0 817 aa6.75□□□□□ -1.33
SMC4-217ENST00000485867 HBS1LQ9Y450 684 aaKnown RBP6.75□□□□□ -1.33
SMC4-217ENST00000485867 SVILO95425 2214 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 ARHGEF17Q96PE2 2063 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 GOLGA6L7A0A1B0GV03 622 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 A0A1W2PQU0 124 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 SH3D21A4FU49 640 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 VPS37CA5D8V6 355 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 D6RAR5 112 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 TPP1O14773 563 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 AQP9O43315 295 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 MSI1O43347 362 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 PRICKLE3O43900 615 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 KIF20AO95235 890 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 CSF2P04141 144 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 KRT7P08729 469 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 JMJD7P0C870 316 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 IDEP14735 1019 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 ITIH1P19827 911 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 HNRNPA2B1P22626 353 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 VAMP1P23763 118 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 SLC6A4P31645 630 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 CCKBRP32239 447 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 LONP1P36776 959 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 ETV5P41161 510 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 STK19P49842 368 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 CYP2J2P51589 502 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 NEK4P51957 841 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 SLC7A5Q01650 507 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 BIRC3Q13489 604 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 FZD2Q14332 565 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 ZNF284Q2VY69 593 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 KRTAP21-3Q3LHN1 58 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 FAM133BQ5BKY9 247 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 PITRM1Q5JRX3 1037 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 FHL5Q5TD97 284 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 OR6B2Q6IFH4 312 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 CAPRIN2Q6IMN6 1127 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 MMS22LQ6ZRQ5 1243 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 BHLHA9Q7RTU4 235 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 PTAR1Q7Z6K3 402 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 ARHGEF39Q8N4T4 335 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 OR6P1Q8NGX9 317 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 PLEKHO2Q8TD55 490 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 ALG3Q92685 438 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 RPL10LQ96L21 214 aaKnown RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 PRICKLE1Q96MT3 831 aaPredicted RBP6.74□□□□□ -1.33
SMC4-217ENST00000485867 SPAG5Q96R06 1193 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 BOCQ9BWV1 1114 aa6.74□□□□□ -1.33
SMC4-217ENST00000485867 DUSP16Q9BY84 665 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms