RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 WNT3AP56704 352 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 RPL26P61254 145 aaKnown RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 BNC1Q01954 994 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 CDK18Q07002 472 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 PRPSAP1Q14558 356 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 IRF4Q15306 451 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 OASLQ15646 514 aaKnown RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 QPCTQ16769 361 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 KIF19Q2TAC6 998 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 CCDC70Q6NSX1 233 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 KDELC1Q6UW63 502 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 KDM7AQ6ZMT4 941 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 GCNT7Q6ZNI0 430 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 RASGEF1CQ8N431 466 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 TMEM145Q8NBT3 493 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 SKA1Q96BD8 255 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 TADA1Q96BN2 335 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 SCRN2Q96FV2 425 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 TRIB3Q96RU7 358 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 NAPGQ99747 312 aaPredicted RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 FSD1LQ9BXM9 530 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 RPL26L1Q9UNX3 145 aaKnown RBP11.88□□□□□ -0.51
HPS4-214ENST00000485842 TMEM131Q92545 1883 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 DMDP11532 3685 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 CACNA1EQ15878 2313 aa11.88□□□□□ -0.51
HPS4-214ENST00000485842 C5orf60A6NFR6 353 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 A6NNZ2 444 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 FPGTO14772 594 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 VILLO15195 856 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 ANXA9O76027 345 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 NDST3O95803 873 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 PCCBP05166 539 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 PIRTP0C851 137 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 THEGLP0DJG4 465 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 IGFALSP35858 605 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 MPP3Q13368 585 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 LRRC14Q15048 493 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 CCNG2Q16589 344 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 FAXCQ5TGI0 409 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 MINDY1Q8N5J2 469 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 SLC25A41Q8N5S1 370 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 MFSD2AQ8NA29 543 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 TP53I13Q8NBR0 393 aaPredicted RBP11.87□□□□□ -0.51
HPS4-214ENST00000485842 DENND6BQ8NEG7 585 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 OR13H1Q8NG92 308 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 ASB12Q8WXK4 309 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 KLHDC7BQ96G42 594 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 MRGPRX2Q96LB1 330 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 KLF6Q99612 283 aaPredicted RBP11.87□□□□□ -0.51
HPS4-214ENST00000485842 GORASP1Q9BQQ3 440 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 MLPHQ9BV36 600 aaPredicted RBP11.87□□□□□ -0.51
HPS4-214ENST00000485842 FICDQ9BVA6 458 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 ANKRD6Q9Y2G4 727 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 PPIL1Q9Y3C6 166 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 SNX11Q9Y5W9 270 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 ZNF292O60281 2723 aa11.87□□□□□ -0.51
HPS4-214ENST00000485842 FRYLO94915 3013 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 WDR87Q6ZQQ6 2873 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 C1orf232A0A0U1RR37 186 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CTAGE9A4FU28 777 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 POM121BA6NF01 834 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 ANKRD66B4E2M5 251 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 TLR4O00206 839 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 ZNF185O15231 689 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 GCATO75600 419 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CLDN7O95471 211 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CER1O95813 267 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 ITGAVP06756 1048 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 C1SP09871 688 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 TCP1P17987 556 aaKnown RBP11.86□□□□□ -0.51
HPS4-214ENST00000485842 ACTN2P35609 894 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 ETV3P41162 512 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CTSKP43235 329 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CHRNA4P43681 627 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 KCNJ1P48048 391 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 NXPH1P58417 271 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 OLIG2Q13516 323 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 WSCD2Q2TBF2 565 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 P3H1Q32P28 736 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 UAP1L1Q3KQV9 507 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 STPG1Q5TH74 334 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 KYAT3Q6YP21 454 aaKnown RBP11.86□□□□□ -0.51
HPS4-214ENST00000485842 GSTA5Q7RTV2 222 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 LYSMD3Q7Z3D4 306 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 HSD11B1LQ7Z5J1 315 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 PRUNE1Q86TP1 453 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 PRELID2Q8N945 189 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CCDC89Q8N998 374 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 NUS1Q96E22 293 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 CAPZA3Q96KX2 299 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 COQ10AQ96MF6 247 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 LENG8Q96PV6 779 aaPredicted RBP11.86□□□□□ -0.51
HPS4-214ENST00000485842 NAP1L3Q99457 506 aaPredicted RBP11.86□□□□□ -0.51
HPS4-214ENST00000485842 APOL2Q9BQE5 337 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 AP1M1Q9BXS5 423 aa11.86□□□□□ -0.51
HPS4-214ENST00000485842 ZDHHC5Q9C0B5 715 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms