RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DLK2Q6UY11 383 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 PATL1Q86TB9 770 aaKnown RBP4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 MOGAT3Q86VF5 341 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 FJX1Q86VR8 437 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 RBFAQ8N0V3 343 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 CLIP4Q8N3C7 705 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 ANKRD44Q8N8A2 993 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 OR4N2Q8NGD1 307 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 SPPL3Q8TCT6 385 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 FAM216AQ8WUB2 273 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 FAM167BQ9BTA0 163 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 RASSF1Q9NS23 344 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 ATP8A2Q9NTI2 1148 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 NLKQ9UBE8 527 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 FEM1BQ9UK73 627 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 CLDN16Q9Y5I7 305 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 KIF20BQ96Q89 1820 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 SCN7AQ01118 1682 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 LAMA3Q16787 3333 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 UNC80Q8N2C7 3258 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 FAM157AC9JC47 383 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 ITM2AO43736 263 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 CKMT1AP12532 417 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 SEC61A1P61619 476 aaKnown RBP4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 PLCB4Q15147 1175 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 ME3Q16798 604 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 IZUMO4Q1ZYL8 232 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 SH2D4BQ5SQS7 431 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 DENND1BQ6P3S1 775 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 CREB3L2Q70SY1 520 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 RILPL2Q969X0 211 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 RNFT2Q96EX2 444 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 NPLQ9BXD5 320 aaPredicted RBP4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 TAOK3Q9H2K8 898 aa4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 WDR6Q9NNW5 1121 aaKnown RBP4.83□□□□□ -1.64
SMARCC1-207ENST00000485833 SMG6Q86US8 1419 aaKnown RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 INSRP06213 1382 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 SOS1Q07889 1333 aaPredicted RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 B9A039 149 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 KCNJ13O60928 360 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 ADAP00813 363 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 SERPINC1P01008 464 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 SERPINB2P05120 415 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 RXRAP19793 462 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 DCTDP32321 178 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 HNF1BP35680 557 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 PDLIM4P50479 330 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 RRP1P56182 461 aaKnown RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 KIF5AQ12840 1032 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 MYBPC2Q14324 1141 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 HLFQ16534 295 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 ANO1Q5XXA6 986 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 FTSJ3Q8IY81 847 aaKnown RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 GHDCQ8N2G8 530 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 CEP70Q8NHQ1 597 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 TBC1D22AQ8WUA7 517 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 ZNF622Q969S3 477 aaKnown RBP eCLIP4.82□□□□□ -1.643e-11■□□□□ 9.8
SMARCC1-207ENST00000485833 RPS6KC1Q96S38 1066 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 TTC12Q9H892 705 aaPredicted RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 HACL1Q9UJ83 578 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 DNAJC16Q9Y2G8 782 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 RRP7AQ9Y3A4 280 aaKnown RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 PCDHGB1Q9Y5G3 927 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 COMMD10Q9Y6G5 202 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 KIAA0100Q14667 2235 aaKnown RBP4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 VCANP13611 3396 aa4.82□□□□□ -1.64
SMARCC1-207ENST00000485833 SNED1Q8TER0 1413 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 PAPPA2Q9BXP8 1791 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 KDM4EB2RXH2 506 aaPredicted RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 IRAK2O43187 625 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 DHX16O60231 1041 aaKnown RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 PPP1R3DO95685 299 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 LDHAP00338 332 aaKnown RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 ITGB8P26012 769 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 EPS15P42566 896 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 GAS1P54826 345 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 TRAF3Q13114 568 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 CTTNQ14247 550 aaKnown RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 EFHC1Q5JVL4 640 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 LMO3Q8TAP4 145 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 COG3Q96JB2 828 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 MSTO1Q9BUK6 570 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 MVB12BQ9H7P6 319 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 ENTPD7Q9NQZ7 604 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 ZNF112Q9UJU3 913 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 AGO1Q9UL18 857 aaKnown RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 CNPY2Q9Y2B0 182 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 GDAQ9Y2T3 454 aa4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 MORC2Q9Y6X9 1032 aaPredicted RBP4.81□□□□□ -1.64
SMARCC1-207ENST00000485833 ROCK2O75116 1388 aaKnown RBP4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 FLT4P35916 1363 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 BTBD18B2RXH4 712 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 H0YIN7 160 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 DHRS4L1P0CG22 281 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 ZNF12P17014 697 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 CTPS1P17812 591 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 CD72P21854 359 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms