RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 AMPD1P23109 780 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 TRIM23P36406 574 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 HSPA9P38646 679 aaKnown RBP17.2■□□□□ 0.34
SMC4-216ENST00000485645 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
SMC4-216ENST00000485645 PDX1P52945 283 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
SMC4-216ENST00000485645 ACOX1Q15067 660 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 FIGNQ5HY92 759 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 KCTD16Q68DU8 428 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
SMC4-216ENST00000485645 POLNQ7Z5Q5 900 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 TAF8Q7Z7C8 310 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 BBS5Q8N3I7 341 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 OR1E3Q8WZA6 343 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMC4-216ENST00000485645 CPNE5Q9HCH3 593 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMC4-216ENST00000485645 ETNK2Q9NVF9 386 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 B4GALT6Q9UBX8 382 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 RABGEF1Q9UJ41 708 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 PCDHGC4Q9Y5F7 938 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 TTC24A2A3L6 582 aaPredicted RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 CDRT15L2A8MXV6 281 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 TMX2-CTNND1H3BSU7 103 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 PDE2AO00408 941 aaPredicted RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 TNFRSF10CO14798 259 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 HTRA2O43464 458 aaPredicted RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 SOCS5O75159 536 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 TNFSF15O95150 251 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 TCF4P15884 667 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 GM2AP17900 193 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 NFKBIAP25963 317 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 CCL7P80098 99 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 IQCB1Q15051 598 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 TDRD12Q587J7 1177 aaKnown RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 ARHGAP40Q5TG30 622 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 PNCKQ6P2M8 343 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 GPR156Q8NFN8 814 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 PDCD6IPQ8WUM4 868 aaKnown RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 NSMCE1Q8WV22 266 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 CSPG4P5Q96PW8 444 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 NUDCD1Q96RS6 583 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 LGR4Q9BXB1 951 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 WDR26Q9H7D7 661 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 FGF22Q9HCT0 170 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 MRPL40Q9NQ50 206 aaKnown RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 KCTD5Q9NXV2 234 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 MOSPD1Q9UJG1 213 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 BZW2Q9Y6E2 419 aaKnown RBP17.19■□□□□ 0.34
SMC4-216ENST00000485645 MGAQ8IWI9 3026 aa17.19■□□□□ 0.34
SMC4-216ENST00000485645 PMS2P1A4D2B8 440 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 MAFKO60675 156 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 PEX11BO96011 259 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 CPP00450 1065 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 RPLP0P05388 317 aaKnown RBP17.18■□□□□ 0.34
SMC4-216ENST00000485645 RARAP10276 462 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 CR2P20023 1033 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 SERPINB6P35237 376 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 SKOR1P84550 965 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 OGFOD3Q6PK18 319 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 CLEC14AQ86T13 490 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 ATPAF2Q8N5M1 289 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 FAM46DQ8NEK8 389 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 TEKT4Q8WW24 435 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 NUS1Q96E22 293 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 STRADBQ9C0K7 418 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 TMEM168Q9H0V1 697 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 LRRN3Q9H3W5 708 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 NOD2Q9HC29 1040 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 CYP4F12Q9HCS2 524 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 PHTF1Q9UMS5 762 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 UNC13CQ8NB66 2214 aa17.18■□□□□ 0.34
SMC4-216ENST00000485645 A0A1W2PQM1 296 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 D6RAR5 112 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 ERVH48-1M5A8F1 160 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 PLD2O14939 933 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 ITGA2BP08514 1039 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 PNLIPP16233 465 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 GLB1P16278 677 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 VIPR1P32241 457 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 INHBCP55103 352 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 CDH6P55285 790 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 TPM4P67936 248 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 RHDQ02161 417 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 VAC14Q08AM6 782 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 EIF3IQ13347 325 aaKnown RBP17.17■□□□□ 0.34
SMC4-216ENST00000485645 CNGA3Q16281 694 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
SMC4-216ENST00000485645 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
SMC4-216ENST00000485645 RALGPS1Q5JS13 557 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 MARC1Q5VT66 337 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 HGSNATQ68CP4 663 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 DENND2CQ68D51 928 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 B3GNT8Q7Z7M8 397 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 PELI3Q8N2H9 469 aa17.17■□□□□ 0.34
SMC4-216ENST00000485645 PGBD5Q8N414 524 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms