RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 PHTF1Q9UMS5 762 aa11.91□□□□□ -0.5
APTX-227ENST00000485479 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.91□□□□□ -0.5
APTX-227ENST00000485479 A0A1B0GVT2 93 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CCDC78A2IDD5 438 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CAPN8A6NHC0 703 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 C10orf142B7Z368 130 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 PROB1E7EW31 1015 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 K7ESM1 405 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 BCAT2O15382 392 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 TSPAN6O43657 245 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 AP1G1O43747 822 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 LZTS3O60299 673 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 GDF9O60383 454 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 GCATO75600 419 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 TM7SF2O76062 418 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 RECQL5O94762 991 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 PCCBP05166 539 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 RETP07949 1114 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CD27P26842 260 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 COILP38432 576 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 POLR2LP62875 67 aaKnown RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 BASP1P80723 227 aaKnown RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 C2orf54Q08AI8 447 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 ELP6Q0PNE2 266 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 PTPRCAPQ14761 206 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 TCEA2Q15560 299 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SLC1A5Q15758 541 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 WDR45BQ5MNZ6 344 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 PLA2G15Q8NCC3 412 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 BLOC1S5Q8TDH9 187 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 UBE2Q2Q8WVN8 375 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 MAIP1Q8WWC4 291 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 DNASE2BQ8WZ79 361 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SCRN2Q96FV2 425 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 KDM4CQ9H3R0 1056 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 BPIFA1Q9NP55 256 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SEMA4GQ9NTN9 838 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CFAP69A5D8W1 941 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SCAMP1O15126 338 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 PHF2O75151 1096 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 URI1O94763 535 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 HEXIM1O94992 359 aaKnown RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 C1SP09871 688 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 TPH1P17752 444 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 TGM1P22735 817 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 CES1P23141 567 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 VIPR1P32241 457 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 PTSQ03393 145 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SGCGQ13326 291 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 IRF4Q15306 451 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 P3H1Q32P28 736 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 TMEM52BQ4KMG9 183 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SETMARQ53H47 684 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 TPRG1LQ5T0D9 272 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 KIAA1161Q6NSJ0 714 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 DRICH1Q6PGQ1 229 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 Q6ZVL8 140 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 ALYREFQ86V81 257 aaKnown RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 KIAA2013Q8IYS2 634 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 C12orf50Q8NA57 414 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 RUBCNQ92622 972 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 SCAMP4Q969E2 229 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
APTX-227ENST00000485479 ADGRE3Q9BY15 652 aa11.9□□□□□ -0.5
APTX-227ENST00000485479 FAM186AA6NE01 2351 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 ZNF292O60281 2723 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 PTPRZ1P23471 2315 aaPredicted RBP11.89□□□□□ -0.51
APTX-227ENST00000485479 GOLGA6L10A0A0M3HER8 536 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 LOC285095A0A1B0GVY8 99 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 TCRBV7S3A2A0A539 114 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 LNP1A1A4G5 178 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 CES2O00748 559 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 GPR39O43194 453 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 NDST3O95803 873 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 APRTP07741 180 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 HNRNPA2B1P22626 353 aaKnown RBP11.89□□□□□ -0.51
APTX-227ENST00000485479 CA4P22748 312 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 STIP1P31948 543 aaKnown RBP11.89□□□□□ -0.51
APTX-227ENST00000485479 ACTN2P35609 894 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 IGFALSP35858 605 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 GRIA4P48058 902 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 CCR5P51681 352 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 GEMP55040 296 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 BNC1Q01954 994 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 MPP3Q13368 585 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 ARHGEF7Q14155 803 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 WSCD2Q2TBF2 565 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 PLA2G2CQ5R387 149 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 ALS2CLQ60I27 953 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 GCNT7Q6ZNI0 430 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 PTAR1Q7Z6K3 402 aaPredicted RBP11.89□□□□□ -0.51
APTX-227ENST00000485479 TMEM145Q8NBT3 493 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 OR13H1Q8NG92 308 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 NAP1L3Q99457 506 aaPredicted RBP11.89□□□□□ -0.51
APTX-227ENST00000485479 TBL1YQ9BQ87 522 aa11.89□□□□□ -0.51
APTX-227ENST00000485479 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms