RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 MMP12P39900 470 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 ZNF165P49910 485 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 LY6DQ14210 128 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 LVRNQ6Q4G3 990 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 ARL14Q8N4G2 192 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 ARL10Q8N8L6 244 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 OR6C4Q8NGE1 309 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 PCDH19Q8TAB3 1148 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 PDCD6IPQ8WUM4 868 aaKnown RBP13.32□□□□□ -0.28
UBA3-210ENST00000485424 PEBP4Q96S96 227 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 CLPBQ9H078 707 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 AIPL1Q9NZN9 384 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 TMEM63CQ9P1W3 806 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 SEPT3Q9UH03 358 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 GPR34Q9UPC5 381 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 OR1A2Q9Y585 309 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 PCDHGA8Q9Y5G5 932 aa13.32□□□□□ -0.28
UBA3-210ENST00000485424 A0A1W2PQ67 120 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 A0A1W2PQC6 194 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 CFAP69A5D8W1 941 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 BUB1BO60566 1050 aaPredicted RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 CELA2BP08218 269 aaPredicted RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 AP1S1P61966 158 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
UBA3-210ENST00000485424 LBRQ14739 615 aaKnown RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 ACOX1Q15067 660 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 ALG11Q2TAA5 492 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 CAVIN1Q6NZI2 390 aaKnown RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 TMCO3Q6UWJ1 677 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 ZNF571Q7Z3V5 609 aaPredicted RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 CLEC14AQ86T13 490 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 WDR36Q8NI36 951 aaKnown RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 HSPH1Q92598 858 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 GFM1Q96RP9 751 aaKnown RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 STRADBQ9C0K7 418 aa13.31□□□□□ -0.28
UBA3-210ENST00000485424 CWC15Q9P013 229 aaKnown RBP13.31□□□□□ -0.28
UBA3-210ENST00000485424 DOPEY2Q9Y3R5 2298 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 CCDC187A0A096LP49 1063 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 GOLGA6CA6NDK9 693 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 GOLGA6BA6NDN3 693 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 A8MX80 341 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 TMX2-CTNND1H3BSU7 103 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 J3QKU1 62 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 K7ENP7 123 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 PDE2AO00408 941 aaPredicted RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 LRCH4O75427 683 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 RECQL5O94762 991 aaPredicted RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 GOLGA6DP0CG33 693 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 SKILP12757 684 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 SERPINB6P35237 376 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 PCK1P35558 622 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 HSPA9P38646 679 aaKnown RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 PRKCIP41743 596 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 SSR1P43307 286 aaKnown RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 RGRP47804 291 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 HCAR3P49019 387 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 PIGHQ14442 188 aaPredicted RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 AGERQ15109 404 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 SMTNL2Q2TAL5 461 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 KIAA1614Q5VZ46 1190 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 DENND2CQ68D51 928 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 INO80CQ6PI98 192 aaPredicted RBP13.3□□□□□ -0.28
UBA3-210ENST00000485424 DPPA4Q7L190 304 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 TAF8Q7Z7C8 310 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 ARHGAP12Q8IWW6 846 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 OR56A4Q8NGH8 313 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 CCDC74AQ96AQ1 378 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 ZNF599Q96NL3 588 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 SYT11Q9BT88 431 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 EPB41L5Q9HCM4 733 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 KCTD5Q9NXV2 234 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 GOLGA6AQ9NYA3 693 aa13.3□□□□□ -0.28
UBA3-210ENST00000485424 A0A1B0GTH6 734 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 DDX3XO00571 662 aaKnown RBP eCLIP13.29□□□□□ -0.28
UBA3-210ENST00000485424 CPP00450 1065 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 ITGA2BP08514 1039 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 CYP2A6P11509 494 aaPredicted RBP13.29□□□□□ -0.28
UBA3-210ENST00000485424 KRT10P13645 584 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 MLLT3P42568 568 aaPredicted RBP13.29□□□□□ -0.28
UBA3-210ENST00000485424 KIAA1024LP59773 190 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 CLN3Q13286 438 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 BIRC2Q13490 618 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 ARHGEF7Q14155 803 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 KRT81Q14533 505 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 NFKBIBQ15653 356 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
UBA3-210ENST00000485424 BOLA3Q53S33 107 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 AFMIDQ63HM1 303 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 LIPIQ6XZB0 460 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 ARHGAP36Q6ZRI8 547 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 ZSWIM9Q86XI8 627 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 ATPAF2Q8N5M1 289 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 NPWQ8N729 165 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 KYQ8NBH2 561 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 NUS1Q96E22 293 aa13.29□□□□□ -0.28
UBA3-210ENST00000485424 LIN37Q96GY3 246 aaPredicted RBP13.29□□□□□ -0.28
UBA3-210ENST00000485424 PSKH2Q96QS6 385 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms