RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SEPT10Q9P0V9 454 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 PHTF1Q9UMS5 762 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 CHKBQ9Y259 395 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 REXO2Q9Y3B8 237 aaKnown RBP12.32□□□□□ -0.44
MSH5-216ENST00000484309 KMT2BQ9UMN6 2715 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 COL27A1Q8IZC6 1860 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 GOLGA6CA6NDK9 693 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 GOLGA6BA6NDN3 693 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 K7ESM1 405 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 AQP9O43315 295 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 PSTPIP1O43586 416 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 GCATO75600 419 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 HEXIM1O94992 359 aaKnown RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 PROS1P07225 676 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 CELA2BP08218 269 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 GOLGA6DP0CG33 693 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 CYP2A6P11509 494 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 PECAM1P16284 738 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 CKMT2P17540 419 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 FECHP22830 423 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 CDKN2BP42772 138 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 PPIDQ08752 370 aaKnown RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 ZNF211Q13398 564 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 MTM1Q13496 603 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 NFATC4Q14934 902 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 AGERQ15109 404 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 PRRT3Q5FWE3 981 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 RALGPS1Q5JS13 557 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 ENPP7Q6UWV6 458 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 SPOCD1Q6ZMY3 1216 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 TMPRSS7Q7RTY8 843 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 HSD11B1LQ7Z5J1 315 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 DAAM2Q86T65 1068 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 HID1Q8IV36 788 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 CCDC50Q8IVM0 306 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 LPCAT1Q8NF37 534 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 ARRDC2Q8TBH0 407 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 PIH1D2Q8WWB5 315 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 KRT35Q92764 455 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 HAUS1Q96CS2 278 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 NUS1Q96E22 293 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 APOLD1Q96LR9 279 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 LRRC61Q9BV99 259 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 LUC7LQ9NQ29 371 aaKnown RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 GOLGA6AQ9NYA3 693 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 NLGN3Q9NZ94 848 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 SAE1Q9UBE0 346 aaPredicted RBP12.31□□□□□ -0.44
MSH5-216ENST00000484309 DUSP10Q9Y6W6 482 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 KIF26BQ2KJY2 2108 aa12.31□□□□□ -0.44
MSH5-216ENST00000484309 A0A0A6YYK5 440 aaPredicted RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 A0A1W2PQ67 120 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CFAP69A5D8W1 941 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 FAM221BA6H8Z2 402 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 NEMP2A6NFY4 417 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ZNF487B1APH4 448 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 FZD6O60353 706 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CST8O60676 142 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 IPO7O95373 1038 aaKnown RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 ALPPL2P10696 532 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 HNF1BP35680 557 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ETV3P41162 512 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CD86P42081 329 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 EPHB1P54762 984 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 NAP1L1P55209 391 aaKnown RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 PPARDQ03181 441 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ADCY2Q08462 1091 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ARHGEF7Q14155 803 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ALG1LQ6GMV1 187 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 C11orf63Q6NUN7 778 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CCNI2Q6ZMN8 369 aaPredicted RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 RFLNAQ6ZTI6 216 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 USP45Q70EL2 814 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 VSIG1Q86XK7 387 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CNTD1Q8N815 330 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 ZCCHC14Q8WYQ9 949 aaKnown RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 FUBP1Q96AE4 644 aaKnown RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 PDXPQ96GD0 296 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 COQ10AQ96MF6 247 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 WDR92Q96MX6 357 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 OLFM3Q96PB7 478 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 MCCC1Q96RQ3 725 aaPredicted RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 IL12RB2Q99665 862 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 DESI2Q9BSY9 194 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 TDRD1Q9BXT4 1180 aaKnown RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 SLC13A1Q9BZW2 595 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 LACRTQ9GZZ8 138 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CLPBQ9H078 707 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 SUDS3Q9H7L9 328 aaPredicted RBP12.3□□□□□ -0.44
MSH5-216ENST00000484309 SPASTQ9UBP0 616 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 KLQ9UEF7 1012 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 CD84Q9UIB8 345 aa12.3□□□□□ -0.44
MSH5-216ENST00000484309 LY6G6EA0A0G2JKS1 128 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 A0A0J9YYE9 177 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 A0A0U1RQJ8 604 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 TMEM202A6NGA9 273 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 CACNB4O00305 520 aaPredicted RBP12.29□□□□□ -0.44
MSH5-216ENST00000484309 TOR1BO14657 336 aa12.29□□□□□ -0.44
MSH5-216ENST00000484309 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms