RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 APOL1O14791 398 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 FZD6O60353 706 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 HEXIM1O94992 359 aaKnown RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 NDUFA10O95299 355 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 JCHAINP01591 159 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 CAPNS1P04632 268 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 ALPPL2P10696 532 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 CTPS1P17812 591 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 FECHP22830 423 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 LHCGRP22888 699 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 DAB2P98082 770 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 PPARDQ03181 441 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 PPIDQ08752 370 aaKnown RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 NIPAL4Q0D2K0 466 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 MTM1Q13496 603 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 C1orf61Q13536 156 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 DEFB133Q30KQ1 61 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 PRRT3Q5FWE3 981 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 DENND2CQ68D51 928 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 MFSD7Q6UXD7 560 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 RFX6Q8HWS3 928 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 TPCN2Q8NHX9 752 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 BTN2A2Q8WVV5 523 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 TSACCQ96A04 125 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 SCRN2Q96FV2 425 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 ZNF830Q96NB3 372 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 SMIM14Q96QK8 99 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 MCCC1Q96RQ3 725 aaPredicted RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 LRRC61Q9BV99 259 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 SLC13A1Q9BZW2 595 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 CLPBQ9H078 707 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 SPASTQ9UBP0 616 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 APOBEC3BQ9UH17 382 aaKnown RBP12.93□□□□□ -0.34
HDAC1-209ENST00000484305 AMACRQ9UHK6 382 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 SALL4Q9UJQ4 1053 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 PPIL1Q9Y3C6 166 aa12.93□□□□□ -0.34
HDAC1-209ENST00000484305 A0A0A6YYK5 440 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 PSTPIP1O43586 416 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 PRLP01236 227 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CELA2BP08218 269 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ALPIP09923 528 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CYP2A6P11509 494 aaPredicted RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CDK4P11802 303 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CKMT1AP12532 417 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CES1P23141 567 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 HTR1BP28222 390 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 HNF1BP35680 557 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 TRIM23P36406 574 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CDKN2BP42772 138 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 HK3P52790 923 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 DYNLT1P63172 113 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 AP1B1Q10567 949 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ZBTB17Q13105 803 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ILKQ13418 452 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CAMK2BQ13554 666 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 NFATC4Q14934 902 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 LLGL1Q15334 1064 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ALG11Q2TAA5 492 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ODF2Q5BJF6 829 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ESRP1Q6NXG1 681 aaKnown RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ENPP7Q6UWV6 458 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 RAD9BQ6WBX8 426 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 B4GALNT4Q76KP1 1039 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 RD3Q7Z3Z2 195 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 HSD11B1LQ7Z5J1 315 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 TSPAN33Q86UF1 283 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 TMPRSS12Q86WS5 348 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 TMTC1Q8IUR5 882 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 HID1Q8IV36 788 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CNTD1Q8N815 330 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 FAM181AQ8N9Y4 354 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ZCCHC14Q8WYQ9 949 aaKnown RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 FUBP1Q96AE4 644 aaKnown RBP12.92□□□□□ -0.34
HDAC1-209ENST00000484305 NUS1Q96E22 293 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 OLFM3Q96PB7 478 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ANP32EQ9BTT0 268 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 DUSP23Q9BVJ7 150 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 LGR4Q9BXB1 951 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 ZMIZ1Q9ULJ6 1067 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 DUSP10Q9Y6W6 482 aa12.92□□□□□ -0.34
HDAC1-209ENST00000484305 RP1P56715 2156 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TMEM8BA6NDV4 472 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TMEM202A6NGA9 273 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 MMP2P08253 660 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 KRT10P13645 584 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 JUPP14923 745 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 TSHRP16473 764 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 ZFXP17010 805 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 NFKBIAP25963 317 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 ETV3P41162 512 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 MARCKSL1P49006 195 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 SRP54P61011 504 aaKnown RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 IFI35P80217 286 aaPredicted RBP12.91□□□□□ -0.34
HDAC1-209ENST00000484305 ADCY2Q08462 1091 aa12.91□□□□□ -0.34
HDAC1-209ENST00000484305 ARHGEF7Q14155 803 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms