RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 B3GALT1Q9Y5Z6 326 aa12.94□□□□□ -0.34
UBR4-213ENST00000483922 ZSCAN5CA6NGD5 496 aaPredicted RBP12.93□□□□□ -0.34
UBR4-213ENST00000483922 WASH4PA8MWX3 477 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 A8MX80 341 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 STMND1H3BQB6 276 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 TNFRSF10CO14798 259 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 ECEL1O95672 775 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 LSM8O95777 96 aaKnown RBP12.93□□□□□ -0.34
UBR4-213ENST00000483922 ALDH4A1P30038 563 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 SDC4P31431 198 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 FMO1Q01740 532 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 RAPGEF1Q13905 1077 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 AFMIDQ63HM1 303 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 WDR59Q6PJI9 974 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 PIM3Q86V86 326 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 UMODL1-AS1Q8N2C9 162 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 CBARPQ8N350 705 aaPredicted RBP12.93□□□□□ -0.34
UBR4-213ENST00000483922 FAM172AQ8WUF8 416 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 NTAN1Q96AB6 310 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 TAAR9Q96RI9 348 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 NDST4Q9H3R1 872 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 LRRC19Q9H756 370 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
UBR4-213ENST00000483922 ATP8A1Q9Y2Q0 1164 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 PLEKHM1Q9Y4G2 1056 aa12.93□□□□□ -0.34
UBR4-213ENST00000483922 ARHGEF17Q96PE2 2063 aaPredicted RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 CFAP69A5D8W1 941 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 DUX1O43812 170 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 CEACAM5P06731 702 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 AK4P27144 223 aaPredicted RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 EPHB2P29323 1055 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 CSF2RBP32927 897 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 CASRP41180 1078 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 MTIF2P46199 727 aaKnown RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 LIMK2P53671 638 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 YBEYP58557 167 aaPredicted RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 PTPRRQ15256 657 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 MAN2A1Q16706 1144 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 VWA3BQ502W6 1294 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 HSP90AA4PQ58FG1 418 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 PNCKQ6P2M8 343 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 DNAAF5Q86Y56 855 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 NAGSQ8N159 534 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 TSEN2Q8NCE0 465 aaKnown RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 ECHDC3Q96DC8 303 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 ZNF641Q96N77 438 aaPredicted RBP12.92□□□□□ -0.34
UBR4-213ENST00000483922 CDH19Q9H159 772 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 KIAA1468Q9P260 1216 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
UBR4-213ENST00000483922 UNC79Q9P2D8 2635 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 LOC101059948A0A1B0GTJ6 334 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 TCRBV5S1A1TA0A578 114 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 PRSS38A1L453 326 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 TTC24A2A3L6 582 aaPredicted RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 F8VZ95 297 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 K7EM74 188 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 CACNB4O00305 520 aaPredicted RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 TRAFD1O14545 582 aaPredicted RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 UNGP13051 313 aaPredicted RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 CCNB1P14635 433 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 UCHL3P15374 230 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 XPAP23025 273 aaPredicted RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 POLD2P49005 469 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 SQSTM1Q13501 440 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 CAMK4Q16566 473 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 ERAP2Q6P179 960 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 BRAT1Q6PJG6 821 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 TIPARPQ7Z3E1 657 aaKnown RBP12.91□□□□□ -0.34
UBR4-213ENST00000483922 SLFN11Q7Z7L1 901 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 SRLQ86TD4 932 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 ATL2Q8NHH9 583 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 ZDHHC1Q8WTX9 485 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 ART4Q93070 314 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 C11orf70Q9BRQ4 267 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 STK33Q9BYT3 514 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 SLC39A8Q9C0K1 460 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 TAAR2Q9P1P5 351 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 PILRAQ9UKJ1 303 aa12.91□□□□□ -0.34
UBR4-213ENST00000483922 IGHV1OR21-1A0A087WYE8 117 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 HGSO14964 777 aaPredicted RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 TEX33O43247 280 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 CREB3O43889 395 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 RAD1O60671 282 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 THRAP10827 490 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 STAT1P42224 750 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 KLK7P49862 253 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 PARP15Q460N3 678 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 TMEM164Q5U3C3 297 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 ANKS6Q68DC2 871 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 UNC5BQ8IZJ1 945 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 CACNA2D3Q8IZS8 1091 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 ABHD17AQ96GS6 310 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 CELF6Q96J87 481 aaKnown RBP12.9□□□□□ -0.34
UBR4-213ENST00000483922 COQ10AQ96MF6 247 aa12.9□□□□□ -0.34
UBR4-213ENST00000483922 NCAPGQ9BPX3 1015 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms