RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 STK19P49842 368 aaPredicted RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 TAS2R39P59534 338 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 RAB10P61026 200 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TMPRSS15P98073 1019 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ECT2LQ008S8 904 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 BCL2L1Q07817 233 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TYSND1Q2T9J0 566 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 MYLK3Q32MK0 819 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 FAM78AQ5JUQ0 283 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TMEM215Q68D42 235 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 C22orf39Q6P5X5 142 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 FAM47EQ6ZV65 393 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SPATA21Q7Z572 469 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SLC41A1Q8IVJ1 513 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ANKS4BQ8N8V4 417 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SMARCD2Q92925 531 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ECHDC3Q96DC8 303 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 MYO19Q96H55 970 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 OMDQ99983 421 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ZNF358Q9NW07 568 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 GDE1Q9NZC3 331 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 IL17CQ9P0M4 197 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SLC25A13Q9UJS0 675 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 CORO1CQ9ULV4 474 aaPredicted RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 PPIL1Q9Y3C6 166 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ATXN2Q99700 1313 aaKnown RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 KIF26AQ9ULI4 1882 aaPredicted RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 RFXAPO00287 272 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 WISP3O95389 354 aaPredicted RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 STMN1P16949 149 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 VIPR2P41587 438 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 IRF9Q00978 393 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SEMA3AQ14563 771 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 CDKN3Q16667 212 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 CARD16Q5EG05 197 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 RARS2Q5T160 578 aaKnown RBP14.07□□□□□ -0.16
CLK3-204ENST00000483723 MBLAC2Q68D91 279 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 MRNIPQ6NTE8 343 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SYCE2Q6PIF2 218 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 CEP97Q8IW35 865 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 AHI1Q8N157 1196 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TMEM151AQ8N4L1 468 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 OR6Y1Q8NGX8 325 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 BPIFB1Q8TDL5 484 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 FGF13Q92913 245 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 E2F7Q96AV8 911 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 GPR78Q96P69 363 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TCF12Q99081 682 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 MECRQ9BV79 373 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TNKS2Q9H2K2 1166 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ATP13A3Q9H7F0 1226 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SLCO3A1Q9UIG8 710 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 TLK1Q9UKI8 766 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 SLC27A6Q9Y2P4 619 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 ACOT9Q9Y305 439 aa14.07□□□□□ -0.16
CLK3-204ENST00000483723 A0A0J9YYE9 177 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 WASH3PC4AMC7 463 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 TGDSO95455 350 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 POP4O95707 220 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 TRBC1P01850 177 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 HOXB8P17481 243 aaPredicted RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 ALDH3A1P30838 453 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 BMP8BP34820 402 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 HMGCLP35914 325 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 HYAL1Q12794 435 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 PCLAFQ15004 111 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 FASTKD1Q53R41 847 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 RBM20Q5T481 1227 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 ATG16L1Q676U5 607 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 AFTPHQ6ULP2 937 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 CCDC91Q7Z6B0 441 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 YTHDF3Q7Z739 585 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 CENPLQ8N0S6 344 aaPredicted RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 EFHBQ8N7U6 833 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 PDCD6IPQ8WUM4 868 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 EID2BQ96D98 161 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 ELMO2Q96JJ3 720 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 MRGPRX3Q96LB0 322 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 LYSMD1Q96S90 227 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 TSSK1BQ9BXA7 367 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 INTS10Q9NVR2 710 aaKnown RBP14.06□□□□□ -0.16
CLK3-204ENST00000483723 COPG2Q9UBF2 871 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 ERVW-1Q9UQF0 538 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 ARL2BPQ9Y2Y0 163 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 VWA7Q9Y334 891 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 ZNF711Q9Y462 761 aa14.06□□□□□ -0.16
CLK3-204ENST00000483723 A0A087X1B8 175 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 STX7O15400 261 aaKnown RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 PHGDHO43175 533 aaKnown RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 SNNO75324 88 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 PIGNO95427 931 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 APOA4P06727 396 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 FGF3P11487 239 aaPredicted RBP14.05□□□□□ -0.16
CLK3-204ENST00000483723 ADH5P11766 374 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 SERPINA4P29622 427 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 GKP32189 559 aa14.05□□□□□ -0.16
CLK3-204ENST00000483723 STC1P52823 247 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms