RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 SUDS3Q9H7L9 328 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 RP1L1Q8IWN7 2480 aaPredicted RBP12.87□□□□□ -0.35
TMEM54-206ENST00000482771 IGHV5-10-1A0A0J9YXX1 117 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 J3KR12 359 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 CYP1A1P04798 512 aaPredicted RBP12.86□□□□□ -0.35
TMEM54-206ENST00000482771 CHRNB2P17787 502 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 CD1CP29017 333 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 ARSDP51689 593 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 KCNAB2Q13303 367 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 WDR59Q6PJI9 974 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 LIPIQ6XZB0 460 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 SRLQ86TD4 932 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 FAM114A1Q8IWE2 563 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 UMODL1-AS1Q8N2C9 162 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 IL22RA1Q8N6P7 574 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 PAF1Q8N7H5 531 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 MLKLQ8NB16 471 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 KIAA1524Q8TCG1 905 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 EPS8L1Q8TE68 723 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 ZDHHC1Q8WTX9 485 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 PMEPA1Q969W9 287 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
TMEM54-206ENST00000482771 LRRK1Q38SD2 2015 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 TEX15Q9BXT5 2789 aa12.86□□□□□ -0.35
TMEM54-206ENST00000482771 WASH4PA8MWX3 477 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 F8VZ95 297 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 PDE2AO00408 941 aaPredicted RBP12.85□□□□□ -0.35
TMEM54-206ENST00000482771 HGSO14964 777 aaPredicted RBP12.85□□□□□ -0.35
TMEM54-206ENST00000482771 ZW10O43264 779 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 GFPT2O94808 682 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 ECEL1O95672 775 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 FUCA1P04066 466 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 NTRK1P04629 796 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 LIFP15018 202 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 GPD1P21695 349 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 MPSTP25325 297 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 UGT1A3P35503 534 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 STAT1P42224 750 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CCR10P46092 362 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 RGRP47804 291 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 POLE2P56282 527 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 FMO1Q01740 532 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CDR2Q01850 454 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 RALGDSQ12967 914 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 BIRC2Q13490 618 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 ACOX1Q15067 660 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 NKAIN2Q5VXU1 208 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 AFMIDQ63HM1 303 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 C17orf82Q86X59 251 aaPredicted RBP12.85□□□□□ -0.35
TMEM54-206ENST00000482771 ZNF677Q86XU0 584 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 NRROSQ86YC3 692 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 PELI3Q8N2H9 469 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 GPBAR1Q8TDU6 330 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CCDC74BQ96LY2 380 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 TUBGCP5Q96RT8 1024 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 SELENOOQ9BVL4 669 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CDH19Q9H159 772 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 EPN3Q9H201 632 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 WDR26Q9H7D7 661 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CATSPERBQ9H7T0 1116 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 CARS2Q9HA77 564 aaKnown RBP12.85□□□□□ -0.35
TMEM54-206ENST00000482771 ZNF71Q9NQZ8 489 aaPredicted RBP12.85□□□□□ -0.35
TMEM54-206ENST00000482771 TAAR2Q9P1P5 351 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 PCDHGA3Q9Y5H0 932 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 B3GALT1Q9Y5Z6 326 aa12.85□□□□□ -0.35
TMEM54-206ENST00000482771 SDK2Q58EX2 2172 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ZFC3H1O60293 1989 aaKnown RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PRSS38A1L453 326 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 NKX2-8O15522 239 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PRAMEF11O60813 436 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PALMO75781 387 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 GP1BBP13224 206 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 CCNB1P14635 433 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 GM2AP17900 193 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 AK4P27144 223 aaPredicted RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 SERPINA4P29622 427 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 CSNK1DP48730 415 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 LIMK2P53671 638 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 POLR2LP62875 67 aaKnown RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PTP4A2Q12974 167 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 CLPPQ16740 277 aaPredicted RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 TSR1Q2NL82 804 aaKnown RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ZNF438Q7Z4V0 828 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 CACNA2D3Q8IZS8 1091 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 AGBL5Q8NDL9 886 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ART4Q93070 314 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 GSDMCQ9BYG8 508 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ATP13A3Q9H7F0 1226 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 PDFQ9HBH1 243 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 FZD10Q9ULW2 581 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 RELNP78509 3460 aa12.84□□□□□ -0.35
TMEM54-206ENST00000482771 SPTBN1Q01082 2364 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms