RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 POM121BA6NF01 834 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CAPN8A6NHC0 703 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 NPIPB15A6NHN6 443 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 A8MX80 341 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 ANKRD66B4E2M5 251 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 H0Y8X5 98 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 KCNN4O15554 427 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 RECQL5O94762 991 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CTPS1P17812 591 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 NFKB1P19838 968 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 HNF1BP35680 557 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 RXRGP48443 463 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 PFN3P60673 137 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CDK18Q07002 472 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 PTK2BQ14289 1009 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 ACOX1Q15067 660 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CNGA3Q16281 694 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 SPATS2Q86XZ4 545 aaKnown RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 RAVER1Q8IY67 606 aaKnown RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CBARPQ8N350 705 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 OR13H1Q8NG92 308 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 MAIP1Q8WWC4 291 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 PPP1R2P1Q96PQ5 205 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 SRPK1Q96SB4 655 aaKnown RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 FAM118BQ9BPY3 351 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 MLPHQ9BV36 600 aaPredicted RBP16.63■□□□□ 0.25
HMGN1-214ENST00000482733 IL21RQ9HBE5 538 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 GPR27Q9NS67 375 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 RSPH14Q9UHP6 348 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 COQ6Q9Y2Z9 468 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 SHROOM3Q8TF72 1996 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 CACNA1EQ15878 2313 aa16.63■□□□□ 0.25
HMGN1-214ENST00000482733 KIF5CO60282 957 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 PCDHGA12O60330 932 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 MT-CYBP00156 380 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-214ENST00000482733 EPOP01588 193 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 ALPIP09923 528 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 CSRP1P21291 193 aaKnown RBP16.62■□□□□ 0.25
HMGN1-214ENST00000482733 LHCGRP22888 699 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 IGFALSP35858 605 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 MPP3Q13368 585 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 PRPSAP1Q14558 356 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 IRF4Q15306 451 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 QPCTQ16769 361 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 WSCD2Q2TBF2 565 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 CRTC1Q6UUV9 634 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
HMGN1-214ENST00000482733 SPATA22Q8NHS9 363 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 SLC35B2Q8TB61 432 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 COQ10AQ96MF6 247 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 SPATA13Q96N96 652 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 TRIB3Q96RU7 358 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 GBA3Q9H227 469 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 SLC32A1Q9H598 525 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 C10orf88Q9H8K7 445 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 USP29Q9HBJ7 922 aa16.62■□□□□ 0.25
HMGN1-214ENST00000482733 MBNL1Q9NR56 388 aaKnown RBP16.62■□□□□ 0.25
HMGN1-214ENST00000482733 PI4KAP42356 2102 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 PLXNA2O75051 1894 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 TCRBV7S2A1N4TA0A589 114 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 C5orf60A6NFR6 353 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 PMPCBO75439 489 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ANXA9O76027 345 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 NDST3O95803 873 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 CD59P13987 128 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 THOP1P52888 689 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 MTM1Q13496 603 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 PCSK7Q16549 785 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 INAVAQ3KP66 663 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ZNF569Q5MCW4 686 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ANKRD20A2Q5SQ80 823 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ANKRD20A1Q5TYW2 823 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ANKRD20A3Q5VUR7 823 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 LRRC66Q68CR7 880 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 DBX2Q6ZNG2 339 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 SLC22A18ASQ8N1D0 253 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 NUS1Q96E22 293 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 DTD2Q96FN9 168 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 TRMT1Q9NXH9 659 aaKnown RBP16.61■□□□□ 0.25
HMGN1-214ENST00000482733 R3HDM2Q9Y2K5 976 aaKnown RBP16.61■□□□□ 0.25
HMGN1-214ENST00000482733 ZKSCAN5Q9Y2L8 839 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 AAR2Q9Y312 384 aaKnown RBP16.61■□□□□ 0.25
HMGN1-214ENST00000482733 CEP250Q9BV73 2442 aa16.61■□□□□ 0.25
HMGN1-214ENST00000482733 SPTY2D1-AS1A0A0U1RR47 76 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 DCDC2BA2VCK2 349 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 FLRT2O43155 660 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 GM2AP17900 193 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 STIP1P31948 543 aaKnown RBP16.6■□□□□ 0.25
HMGN1-214ENST00000482733 GEMP55040 296 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 WNT3AP56704 352 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 PDE1CQ14123 709 aaPredicted RBP16.6■□□□□ 0.25
HMGN1-214ENST00000482733 GALNT3Q14435 633 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 FAM182AQ5T1J6 154 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 DENND2CQ68D51 928 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 ESRP1Q6NXG1 681 aaKnown RBP16.6■□□□□ 0.25
HMGN1-214ENST00000482733 KDELC1Q6UW63 502 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 DGLUCYQ7Z3D6 616 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 HSD11B1LQ7Z5J1 315 aa16.6■□□□□ 0.25
HMGN1-214ENST00000482733 PIP4P1Q86T03 277 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms