RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 ZNF883P0CG24 379 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 RABIFP47224 123 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 CDK18Q07002 472 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 ACOX1Q15067 660 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 PCSK7Q16549 785 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 ZNF423Q2M1K9 1284 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 CCDC70Q6NSX1 233 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 TP53I13Q8NBR0 393 aaPredicted RBP20.97■□□□□ 0.95
SEC13-217ENST00000482647 SLC35B2Q8TB61 432 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 IL21RQ9HBE5 538 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 USP29Q9HBJ7 922 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 FAM153AQ9UHL3 310 aa20.97■□□□□ 0.95
SEC13-217ENST00000482647 TRPM6Q9BX84 2022 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 PMPCBO75439 489 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 TNNT3P45378 269 aaPredicted RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 ID4P47928 161 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 PUM1Q14671 1186 aaKnown RBP eCLIP20.96■□□□□ 0.95
SEC13-217ENST00000482647 CNGA3Q16281 694 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 WSCD2Q2TBF2 565 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 ANKRD20A2Q5SQ80 823 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 ANKRD20A1Q5TYW2 823 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 ANKRD20A3Q5VUR7 823 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 KDELC2Q7Z4H8 507 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 PTAR1Q7Z6K3 402 aaPredicted RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 SPATS2Q86XZ4 545 aaKnown RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 CBARPQ8N350 705 aaPredicted RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 OXR1Q8N573 874 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 OR13H1Q8NG92 308 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 ELF4Q99607 663 aaPredicted RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 MLPHQ9BV36 600 aaPredicted RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 MBNL1Q9NR56 388 aaKnown RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 KCTD5Q9NXV2 234 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 UBP1Q9NZI7 540 aa20.96■□□□□ 0.95
SEC13-217ENST00000482647 FNDC3AQ9Y2H6 1198 aaKnown RBP20.96■□□□□ 0.95
SEC13-217ENST00000482647 KNL1Q8NG31 2342 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 CAPN8A6NHC0 703 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 PSMD11O00231 422 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 TOR1BO14657 336 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 ENC1O14682 589 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 CEP104O60308 925 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 LHCGRP22888 699 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 ARRB1P49407 418 aaPredicted RBP20.95■□□□□ 0.94
SEC13-217ENST00000482647 PTPRRQ15256 657 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 IRF4Q15306 451 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 QPCTQ16769 361 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 PRAMEF14Q5SWL7 426 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 DENND2CQ68D51 928 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 CRTC1Q6UUV9 634 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 TSPAN33Q86UF1 283 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 FAM71DQ8N9W8 422 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 MAIP1Q8WWC4 291 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 COQ10AQ96MF6 247 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 SPATA13Q96N96 652 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 TRIB3Q96RU7 358 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 LYSMD1Q96S90 227 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 GBA3Q9H227 469 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 TM7SF3Q9NS93 570 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 PCDH15Q96QU1 1955 aa20.95■□□□□ 0.94
SEC13-217ENST00000482647 C5orf60A6NFR6 353 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 TM4SF5O14894 197 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 LIASO43766 372 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 ANXA9O76027 345 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 NDST3O95803 873 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 EPOP01588 193 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 FGGP02679 453 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 ZNF30P17039 623 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 CXCR5P32302 372 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 IGFALSP35858 605 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 WNT3AP56704 352 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 PFN3P60673 137 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 YPEL5P62699 121 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 MPP3Q13368 585 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 GALNT3Q14435 633 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 PRPSAP1Q14558 356 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 SUZ12Q15022 739 aaKnown RBP20.94■□□□□ 0.94
SEC13-217ENST00000482647 LRRC66Q68CR7 880 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 CCDC110Q8TBZ0 833 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 PPP1R2P1Q96PQ5 205 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 SMIM14Q96QK8 99 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 PYCARDQ9ULZ3 195 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 PCDHGB2Q9Y5G2 931 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 SPTBN4Q9H254 2564 aa20.94■□□□□ 0.94
SEC13-217ENST00000482647 A0A1B0GTQ1 180 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 GOLGA8CPA6NN73 597 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 F5H423 210 aaPredicted RBP20.93■□□□□ 0.94
SEC13-217ENST00000482647 YKT6O15498 198 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 GM2AP17900 193 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 STIP1P31948 543 aaKnown RBP20.93■□□□□ 0.94
SEC13-217ENST00000482647 RXRGP48443 463 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 CCT8P50990 548 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 PTSQ03393 145 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 PTK2BQ14289 1009 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 INPP5AQ14642 412 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 LONRF2Q1L5Z9 754 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 KDELC1Q6UW63 502 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 HSD11B1LQ7Z5J1 315 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 SLC22A18ASQ8N1D0 253 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 SLC35F6Q8N357 371 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 ATG4AQ8WYN0 398 aa20.93■□□□□ 0.94
SEC13-217ENST00000482647 NUS1Q96E22 293 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms