RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 RPS21P63220 83 aaKnown RBP6.52□□□□□ -1.37
CHD6-209ENST00000482596 RBP5P82980 135 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 NR1D2Q14995 579 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 PCSK7Q16549 785 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 CLPPQ16740 277 aaPredicted RBP6.52□□□□□ -1.37
CHD6-209ENST00000482596 RNF219Q5W0B1 726 aaPredicted RBP6.52□□□□□ -1.37
CHD6-209ENST00000482596 CES4AQ5XG92 561 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 TMEM71Q6P5X7 295 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 GFRALQ6UXV0 394 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 CAPN12Q6ZSI9 719 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 DYMQ7RTS9 669 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 ARHGAP22Q7Z5H3 698 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 TAF8Q7Z7C8 310 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 FUKQ8N0W3 1084 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 CCL4L1Q8NHW4 92 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 AZIN2Q96A70 460 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 SMARCD1Q96GM5 515 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 POLDIP3Q9BY77 421 aaKnown RBP6.52□□□□□ -1.37
CHD6-209ENST00000482596 MTMR12Q9C0I1 747 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 LSG1Q9H089 658 aaKnown RBP6.52□□□□□ -1.37
CHD6-209ENST00000482596 TMEM60Q9H2L4 133 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 DPEP2Q9H4A9 486 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 LHX9Q9NQ69 397 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 MARCH2Q9P0N8 246 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
CHD6-209ENST00000482596 ANKRD36A6QL64 1941 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CCDC196A0A1B0GTZ2 297 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 MCF2LO15068 1137 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 SASH3O75995 380 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PROCP04070 461 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PLS3P13797 630 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CCDC130P13994 396 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 IFNAR1P17181 557 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 EGR1P18146 543 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 LPOP22079 712 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 PTPN4P29074 926 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 GARSP41250 739 aaKnown RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 BLKP51451 505 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 RCAN1P53805 252 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CDC16Q13042 620 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 TCEAL1Q15170 157 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 NECTIN1Q15223 517 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 TRIP4Q15650 581 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 ADGRF1Q5T601 910 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PIK3R6Q5UE93 754 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 ANKRD40Q6AI12 368 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 ZNF324BQ6AW86 544 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 ADALQ6DHV7 355 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 KIAA1161Q6NSJ0 714 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 FOXR2Q6PJQ5 311 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 TMEM207Q6UWW9 146 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 C1orf186Q6ZWK4 172 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CAMKMTQ7Z624 323 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 SYVN1Q86TM6 617 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 NT5DC4Q86YG4 428 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CARNMT1Q8N4J0 409 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 ZADH2Q8N4Q0 377 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PATE1Q8WXA2 126 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 RMND5BQ96G75 393 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 PDXPQ96GD0 296 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 HPDLQ96IR7 371 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 ELMO2Q96JJ3 720 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PRICKLE1Q96MT3 831 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 RBM15Q96T37 977 aaKnown RBP eCLIP6.51□□□□□ -1.371e-7■■□□□ 14.2
CHD6-209ENST00000482596 NAP1L4Q99733 375 aaKnown RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 ZNF552Q9H707 407 aaPredicted RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 C17orf75Q9HAS0 396 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 MBNL1Q9NR56 388 aaKnown RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 PPP4R2Q9NY27 417 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 ZFATQ9P243 1243 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PDP2Q9P2J9 529 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 LNPEPQ9UIQ6 1025 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 TINAGQ9UJW2 476 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 STOML2Q9UJZ1 356 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 AGO2Q9UKV8 859 aaKnown RBP6.51□□□□□ -1.37
CHD6-209ENST00000482596 ITGA11Q9UKX5 1188 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 PADI1Q9ULC6 663 aa6.51□□□□□ -1.37
CHD6-209ENST00000482596 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 A8MXQ7 604 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 C21orf140B9A014 251 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 CLIC2O15247 247 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 PPM1DO15297 605 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 CTAG2O75638 210 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 UNC5CO95185 931 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 IL18RAPO95256 599 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 RASGRP1O95267 797 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 NDUFA10O95299 355 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 ESRRAP11474 423 aaPredicted RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 NID1P14543 1247 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 PDIA3P30101 505 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 TSFMP43897 325 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 NCKAP1LP55160 1127 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 YPEL5P62699 121 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 RPS24P62847 133 aaKnown RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 NKX6-1P78426 367 aaPredicted RBP6.5□□□□□ -1.37
CHD6-209ENST00000482596 MYBPHQ13203 477 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SGCGQ13326 291 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 SQSTM1Q13501 440 aa6.5□□□□□ -1.37
CHD6-209ENST00000482596 C3AR1Q16581 482 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms