RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 CAND1Q86VP6 1230 aaKnown RBP20.77■□□□□ 0.92
VPS16-207ENST00000481812 TRIM69Q86WT6 500 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 CADM4Q8NFZ8 388 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 RLN3Q8WXF3 142 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 ASB12Q8WXK4 309 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 ART4Q93070 314 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 SERPINB12Q96P63 405 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 RANBP9Q96S59 729 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 EPB41L5Q9HCM4 733 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 KCTD5Q9NXV2 234 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 BFARQ9NZS9 450 aa20.77■□□□□ 0.92
VPS16-207ENST00000481812 TBC1D3DA0A087WVF3 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3IA0A087WXS9 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3EA0A087X179 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3KA0A087X1G2 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3FA6NER0 549 aaPredicted RBP20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3LB9A6J9 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 DLL1O00548 723 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 PCDH8O95206 1070 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 PRKCGP05129 697 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3HP0C7X1 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 CCR5P51681 352 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TERF1P54274 439 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 RPS21P63220 83 aaKnown RBP20.76■□□□□ 0.91
VPS16-207ENST00000481812 PDE1BQ01064 536 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 CREB5Q02930 508 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 AGERQ15109 404 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TAF1AQ15573 450 aaPredicted RBP20.76■□□□□ 0.91
VPS16-207ENST00000481812 CNGA3Q16281 694 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 SPDYCQ5MJ68 293 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TEX35Q5T0J7 233 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3GQ6DHY5 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3CQ6IPX1 549 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TMC3Q7Z5M5 1100 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 HORMAD1Q86X24 394 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 TBC1D3Q8IZP1 549 aaPredicted RBP20.76■□□□□ 0.91
VPS16-207ENST00000481812 CXorf40AQ8TE69 158 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 GAB3Q8WWW8 586 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 RUBCNQ92622 972 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 FOXP3Q9BZS1 431 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 IL22Q9GZX6 179 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 ZFYVE1Q9HBF4 777 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 GDF3Q9NR23 364 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 MBD1Q9UIS9 605 aaPredicted RBP20.76■□□□□ 0.91
VPS16-207ENST00000481812 GGT7Q9UJ14 662 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 ITM2BQ9Y287 266 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 ZNF711Q9Y462 761 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 PCDHGA2Q9Y5H1 932 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 SPO11Q9Y5K1 396 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 MYLKQ15746 1914 aa20.76■□□□□ 0.91
VPS16-207ENST00000481812 C1orf232A0A0U1RR37 186 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 NDUFS2O75306 463 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 CRTAMO95727 393 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 LHCGRP22888 699 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 HMGCLP35914 325 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 NUDT1P36639 197 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 LIG3P49916 1009 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 STC1P52823 247 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 PTSQ03393 145 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 TMEM259Q4ZIN3 620 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 LRRC66Q68CR7 880 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 IFT20Q8IY31 132 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 TTC30BQ8N4P2 665 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 BLOC1S5Q8TDH9 187 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 PTCD2Q8WV60 388 aaKnown RBP20.75■□□□□ 0.91
VPS16-207ENST00000481812 SMIM14Q96QK8 99 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 PHACTR1Q9C0D0 580 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 RIMKLBQ9ULI2 386 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 SPAG17Q6Q759 2223 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 SCN8AQ9UQD0 1980 aa20.75■□□□□ 0.91
VPS16-207ENST00000481812 DOCK9Q9BZ29 2069 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 ABCA7Q8IZY2 2146 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 RGSL1A5PLK6 1076 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 C2orf81A6NN90 581 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 LATO43561 262 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 RNGTTO60942 597 aaKnown RBP20.74■□□□□ 0.91
VPS16-207ENST00000481812 LILRB5O75023 590 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 CLDN7O95471 211 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 RHOXF2BP0C7M4 288 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 ELFN1P0C7U0 828 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 PIRTP0C851 137 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 TPH1P17752 444 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 ADRA1DP25100 572 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 CUL1Q13616 776 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 PTPRRQ15256 657 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 PCID2Q5JVF3 399 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 LYSMD3Q7Z3D4 306 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 GLT6D1Q7Z4J2 308 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 TSPAN33Q86UF1 283 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 PDIK1LQ8N165 341 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 ZCCHC9Q8N567 271 aaKnown RBP20.74■□□□□ 0.91
VPS16-207ENST00000481812 FAM160A2Q8N612 972 aaPredicted RBP20.74■□□□□ 0.91
VPS16-207ENST00000481812 FRMD1Q8N878 549 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 EIF1ADQ8N9N8 165 aaKnown RBP20.74■□□□□ 0.91
VPS16-207ENST00000481812 PEX13Q92968 403 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 RHOXF2Q9BQY4 288 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 GPR174Q9BXC1 333 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 C1QTNF2Q9BXJ5 285 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 GPR63Q9BZJ6 419 aa20.74■□□□□ 0.91
VPS16-207ENST00000481812 DUSP15Q9H1R2 295 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms