RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ZNF883	P0CG24	379 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	G6PD	P11413	515 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	ETFA	P13804	333 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	EIF2S3	P41091	472 aa	Known RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	PAPOLA	P51003	745 aa	Known RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	ARL4C	P56559	192 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	TBL3	Q12788	808 aa	Known RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	GRIK3	Q13003	919 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	VEPH1	Q14D04	833 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	ZNF772	Q68DY9	489 aa	Predicted RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	PLEKHA7	Q6IQ23	1121 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	SIN3A	Q96ST3	1273 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	REEP2	Q9BRK0	252 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	PHF7	Q9BWX1	381 aa	Predicted RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	HEMGN	Q9BXL5	484 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	CSTL1	Q9H114	145 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	TTYH1	Q9H313	450 aa	Predicted RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	DDX4	Q9NQI0	724 aa	Known RBP	3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	CNGB3	Q9NQW8	809 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	ZFP57	Q9NU63	452 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	RCOR1	Q9UKL0	485 aa		3.22	□□□□□ -1.89
CCNL1-223	ENST00000481173	C16orf97	H3BN30	126 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	P2RY10	O00398	339 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	TIPRL	O75663	272 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	CETP	P11597	493 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	DDIT3	P35638	169 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	ECT2L	Q008S8	904 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	REL	Q04864	619 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	OS9	Q13438	667 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	SYT16	Q17RD7	645 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	EIF2S3L	Q2VIR3	472 aa	Known RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	WDR45B	Q5MNZ6	344 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	SERTAD4-AS1	Q5TG53	156 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	IRAK1BP1	Q5VVH5	260 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	ANKRD54	Q6NXT1	300 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC26A9	Q7LBE3	791 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	DSG4	Q86SJ6	1040 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	KRTAP7-1	Q8IUC3	87 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	EPHX4	Q8IUS5	362 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	FOXRED2	Q8IWF2	684 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	PLD5	Q8N7P1	536 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	USP38	Q8NB14	1042 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	LSM14A	Q8ND56	463 aa	Known RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	BBS10	Q8TAM1	723 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	LNX1	Q8TBB1	728 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	USP13	Q92995	863 aa	Predicted RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	DUX3	Q96PT4	197 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	C1RL	Q9NZP8	487 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	TINAG	Q9UJW2	476 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	CARD8	Q9Y2G2	431 aa		3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	LSM4	Q9Y4Z0	139 aa	Known RBP	3.21	□□□□□ -1.9
CCNL1-223	ENST00000481173	TAF1	P21675	1872 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	IFNL4	K9M1U5	179 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	BCAT2	O15382	392 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	EDIL3	O43854	480 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	FGF17	O60258	216 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	RFPL2	O75678	378 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC22A3	O75751	556 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	LDHA	P00338	332 aa	Known RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	AMBP	P02760	352 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	UROD	P06132	367 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	CYC1	P08574	325 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	GPT	P24298	496 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	MCM3	P25205	808 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	LINC01547	P58512	204 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	TAF11	Q15544	211 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SGO1	Q5FBB7	561 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	FBXO47	Q5MNV8	452 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC22A25	Q6T423	547 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC36A4	Q6YBV0	504 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	CCNI2	Q6ZMN8	369 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	MTSS1L	Q765P7	747 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	TADA2B	Q86TJ2	420 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	DHX40	Q8IX18	779 aa	Known RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	AGBL3	Q8NEM8	1001 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	DUSP19	Q8WTR2	217 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SLC20A1	Q8WUM9	679 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	ELP4	Q96EB1	424 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	BBS4	Q96RK4	519 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	ARPC5L	Q9BPX5	153 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	PYM1	Q9BRP8	204 aa	Known RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	HAUS8	Q9BT25	410 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	KCNN2	Q9H2S1	579 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	C17orf75	Q9HAS0	396 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	FBRSL1	Q9HCM7	1045 aa	Known RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	KIAA1456	Q9P272	454 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	POU2F3	Q9UKI9	436 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	RALY	Q9UKM9	306 aa	Known RBP	3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	SMAD5-AS1	Q9Y6J3	95 aa		3.2	□□□□□ -1.9
CCNL1-223	ENST00000481173	FAM172BP	A6NC97	362 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	TSPAN3	O60637	253 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	CDH1	P12830	882 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	HLA-DOB	P13765	273 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	CD58	P19256	250 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	MARK3	P27448	753 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	CHAT	P28329	748 aa		3.19	□□□□□ -1.9
CCNL1-223	ENST00000481173	IL15	P40933	162 aa	Predicted RBP	3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms