RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HOXB5P09067 269 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 TMEM11P17152 192 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 C17orf67Q0P5P2 114 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 DRAP1Q14919 205 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 HS1BP3Q53T59 392 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 AARS2Q5JTZ9 985 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 TMEM65Q6PI78 240 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 RBPMS2Q6ZRY4 209 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 DEFB132Q7Z7B7 95 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 C16orf71Q8IYS4 520 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 OR4N2Q8NGD1 307 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 IL17DQ8TAD2 202 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 FAR1Q8WVX9 515 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 SGCDQ92629 289 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 LINC00615Q96LM1 132 aaPredicted RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 AGAP2Q99490 1192 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 COQ3Q9NZJ6 369 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 TUBE1Q9UJT0 475 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 ST3GAL5Q9UNP4 418 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 UNC13BO14795 1591 aa7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 GPATCH8Q9UKJ3 1502 aaKnown RBP7.57□□□□□ -1.2
GAPVD1-217ENST00000479511 EMSYQ7Z589 1322 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 TIAM1Q13009 1591 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 SAMD9LQ8IVG5 1584 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 KIAA1107Q9UPP5 1409 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 A0A1B0GVM2 712 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 GTPBP10A4D1E9 387 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 FAM157AC9JC47 383 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 PLRG1O43660 514 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 FMO6PO60774 539 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 SLCO2B1O94956 709 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 TTLL1O95922 423 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 AKR1A1P14550 325 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 MMP9P14780 707 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 PTPN2P17706 415 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 HOXC8P31273 242 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 RYKP34925 604 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 CCR10P46092 362 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 ACSM2AQ08AH3 577 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 NFE2L1Q14494 772 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 SLMAPQ14BN4 828 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF674Q2M3X9 581 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 LETM2Q2VYF4 491 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 CDONQ4KMG0 1287 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 LRIF1Q5T3J3 769 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 KRT79Q5XKE5 535 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 ACSM2BQ68CK6 577 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 QSOX2Q6ZRP7 698 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 SEPT14Q6ZU15 432 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 NOXA1Q86UR1 476 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 WDR5BQ86VZ2 330 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 XXYLT1Q8NBI6 393 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 KAT2AQ92830 837 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 PTERQ96BW5 349 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 RAB3IPQ96QF0 476 aaPredicted RBP7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 WDR11Q9BZH6 1224 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF304Q9HCX3 659 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 MLXIPLQ9NP71 852 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 CHCHD3Q9NX63 227 aaKnown RBP7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 OSGIN1Q9UJX0 560 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 FZD1Q9UP38 647 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 TNFSF13BQ9Y275 285 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 CARD8Q9Y2G2 431 aa7.56□□□□□ -1.2
GAPVD1-217ENST00000479511 SCAF11Q99590 1463 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 MST1RQ04912 1400 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 VPS8Q8N3P4 1428 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 MIA2Q96PC5 1412 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 TCRBV21S2A2A0A5A6 115 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 A6NL46 340 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 H0YAE9 185 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 HNRNPCP07910 306 aaKnown RBP eCLIP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 FDPSP14324 419 aaKnown RBP7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 TACR2P21452 398 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 SHMT1P34896 483 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 KRT2P35908 639 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 ATP6V1E1P36543 226 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 HNF4AP41235 474 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 NPY4RP50391 375 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 CCT8P50990 548 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 CCR3P51677 355 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 NAB2Q15742 525 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 PCGF3Q3KNV8 242 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 COLEC12Q5KU26 742 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 ZNF804AQ7Z570 1209 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 TBC1D26Q86UD7 250 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 CCDC13Q8IYE1 715 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 OR8H1Q8NGG4 311 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 MOSPD2Q8NHP6 518 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 HDAC7Q8WUI4 952 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 ZFPM2Q8WW38 1151 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 PTP4A1Q93096 173 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 P2RY11Q96G91 374 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 PPP1R13BQ96KQ4 1090 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 TEPSINQ96N21 525 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 HIPK3Q9H422 1215 aa7.55□□□□□ -1.2
GAPVD1-217ENST00000479511 COPS7BQ9H9Q2 264 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms