RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 TAS2R40P59535 323 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 CXCL9Q07325 125 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 SOWAHAQ2M3V2 549 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 ZNF628Q5EBL2 1059 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 ASPHD1Q5U4P2 390 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 DAB2IPQ5VWQ8 1189 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 KRT80Q6KB66 452 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 CRIP3Q6Q6R5 217 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 OLFML1Q6UWY5 402 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 TRILQ7L0X0 811 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 CCDC186Q7Z3E2 898 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 GSDMBQ8TAX9 411 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 TRPC4APQ8TEL6 797 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 DDX4Q9NQI0 724 aaKnown RBP5.28□□□□□ -1.56
UPF3B-203ENST00000478840 ARHGEF38Q9NXL2 777 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 CWC15Q9P013 229 aaKnown RBP5.28□□□□□ -1.56
UPF3B-203ENST00000478840 PPIEQ9UNP9 301 aaKnown RBP5.28□□□□□ -1.56
UPF3B-203ENST00000478840 RAP2CQ9Y3L5 183 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 NFE2L3Q9Y4A8 694 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 ARHGEF40Q8TER5 1519 aa5.28□□□□□ -1.56
UPF3B-203ENST00000478840 LRRC72A6NJI9 287 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ATP2C2O75185 946 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 AVILO75366 819 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 TPOP07202 933 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ABCB1P08183 1280 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 MYBL1P10243 752 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ENO3P13929 434 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 TACR2P21452 398 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 RFC1P35251 1148 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 MRPS34P82930 218 aaKnown RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 STIM1Q13586 685 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 SNTB1Q13884 538 aaKnown RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ZNF268Q14587 947 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 LPIN1Q14693 890 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 SLC9C1Q4G0N8 1177 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 PIK3CD-AS1Q5SR53 167 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 PRAMEF19Q5SWL8 479 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 LRCH2Q5VUJ6 765 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 PAPD7Q5XG87 772 aaKnown RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 FBXO46Q6PJ61 603 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 EPHX4Q8IUS5 362 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ZBTB2Q8N680 514 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 LRRC57Q8N9N7 239 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 APPL2Q8NEU8 664 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 BICD2Q8TD16 824 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 PTPMT1Q8WUK0 201 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 IGSF8Q969P0 613 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 OTULINQ96BN8 352 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 RRNAD1Q96FB5 475 aaKnown RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ZNF419Q96HQ0 510 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 CEP295NLQ96MC4 621 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 PAFAH2Q99487 392 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 SH2D3AQ9BRG2 576 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 IFIH1Q9BYX4 1025 aaKnown RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 B3GNT4Q9C0J1 378 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ZWILCHQ9H900 591 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 MRGBPQ9NV56 204 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 ARGLU1Q9NWB6 273 aaPredicted RBP5.27□□□□□ -1.57
UPF3B-203ENST00000478840 WDR35Q9P2L0 1181 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 BTBD3Q9Y2F9 522 aa5.27□□□□□ -1.57
UPF3B-203ENST00000478840 LINC01548A6NM66 108 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 PI4K2BG5E9Z4 385 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 CLDN7O95471 211 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 LATS1O95835 1130 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 HIST1H2ABP04908 130 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 IFNAR1P17181 557 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 HIST1H2ADP20671 130 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 CTNNA1P35221 906 aaKnown RBP5.26□□□□□ -1.57
UPF3B-203ENST00000478840 RPS13P62277 151 aaKnown RBP5.26□□□□□ -1.57
UPF3B-203ENST00000478840 NAE1Q13564 534 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 ALCAMQ13740 583 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 LRIF1Q5T3J3 769 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 CES5AQ6NT32 575 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 DEF8Q6ZN54 512 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 HIST3H2AQ7L7L0 130 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 CHST3Q7LGC8 479 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 MMP21Q8N119 569 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 PARP16Q8N5Y8 322 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 HORMAD2Q8N7B1 307 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 TEX45Q8NA69 505 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 FAM98AQ8NCA5 519 aaKnown RBP5.26□□□□□ -1.57
UPF3B-203ENST00000478840 OR14L1PQ8NHC6 308 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM163Q8TC26 289 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 RMDN1Q96DB5 314 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 HARBI1Q96MB7 349 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 CFAP57Q96MR6 1250 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 KLHL31Q9H511 634 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 GDE1Q9NZC3 331 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 SELENONQ9NZV5 590 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 COPG2Q9UBF2 871 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 PLAGL1Q9UM63 463 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 WBP11Q9Y2W2 641 aaKnown RBP5.26□□□□□ -1.57
UPF3B-203ENST00000478840 INSL6Q9Y581 213 aa5.26□□□□□ -1.57
UPF3B-203ENST00000478840 SOS1Q07889 1333 aaPredicted RBP5.25□□□□□ -1.57
UPF3B-203ENST00000478840 WDR17Q8IZU2 1322 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 GPR75-ASB3A0A0A6YYF3 556 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 A0A0G2JK05 382 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 LNP1A1A4G5 178 aa5.25□□□□□ -1.57
UPF3B-203ENST00000478840 TMEM202A6NGA9 273 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms