RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 GLIS1Q8NBF1 620 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ITFG1Q8TB96 612 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 AZIN2Q96A70 460 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 CDH19Q9H159 772 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 IGSF9Q9P2J2 1179 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 TMEM59LQ9UK28 342 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 KAT6AQ92794 2004 aa14.25□□□□□ -0.13
NPHP4-208ENST00000478423 ANKDD1BA6NHY2 528 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 CCL16O15467 120 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 STBD1O95210 358 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 COX7A2P14406 83 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 RUNX1T1Q06455 604 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 RP9Q8TA86 221 aaKnown RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 STYXQ8WUJ0 223 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 SLCO2A1Q92959 643 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 HIC2Q96JB3 615 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 ZNF184Q99676 751 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 SEMA6AQ9H2E6 1030 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 GDAP2Q9NXN4 497 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 CDV3Q9UKY7 258 aaKnown RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 TRAFD1O14545 582 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 PLIN3O60664 434 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 FGBP02675 491 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 ELFN1P0C7U0 828 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 LINC00032P0C843 101 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 EDNRBP24530 442 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 GRIA1P42261 906 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 GRIA3P42263 894 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 MAPKAPK2P49137 400 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 CDH4P55283 916 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 INCA1Q0VD86 236 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 CUZD1Q86UP6 607 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 SUSD3Q96L08 255 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 PPP3R2Q96LZ3 170 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 ANKRD27Q96NW4 1050 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 XYLT2Q9H1B5 865 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 TLE6Q9H808 572 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 C9IYK1 514 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 QSOX1O00391 747 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 MAGEC1O60732 1142 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 KRT36O76013 467 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 IPO13O94829 963 aaKnown RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 FTH1P02794 183 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 OCM2P0CE71 109 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 OCMP0CE72 109 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 NDST2P52849 883 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 GJA9P57773 515 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 TAPT1Q6NXT6 567 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 OSTM1Q86WC4 334 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 DENND6AQ8IWF6 608 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 NAT8LQ8N9F0 302 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 SMG7Q92540 1137 aaKnown RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 DEC1Q9P2X7 70 aa14.24□□□□□ -0.13
NPHP4-208ENST00000478423 ARIH1Q9Y4X5 557 aaPredicted RBP14.24□□□□□ -0.13
NPHP4-208ENST00000478423 AOC2O75106 756 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 CACNA2D1P54289 1103 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 PRMT2P55345 433 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 RPS24P62847 133 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 SULT2A1Q06520 285 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ARL13AQ5H913 290 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 DNAJC1Q96KC8 554 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ARL8BQ9NVJ2 186 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TMEM216Q9P0N5 145 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TCRBV7S3A2A0A539 114 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TK2O00142 265 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ARVCFO00192 962 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 SNUPNO95149 360 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 APOA1P02647 267 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 S100A5P33763 92 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TXNDC11Q6PKC3 985 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 GPR141Q7Z602 305 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 FITM2Q8N6M3 262 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TPD52L3Q96J77 140 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 HAPLN3Q96S86 360 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 UGT2B28Q9BY64 529 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 LEF1Q9UJU2 399 aaPredicted RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ITM2BQ9Y287 266 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 KCNE2Q9Y6J6 123 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 SLC38A8A6NNN8 435 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 RASSF9O75901 435 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 FAM58BPP0C7Q3 252 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 PIK3R1P27986 724 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 LYPLAL1Q5VWZ2 237 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 DLG3Q92796 817 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ZMAT2Q96NC0 199 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 AGAP2Q99490 1192 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 GPR21Q99679 349 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TBC1D14Q9P2M4 693 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 ZNF229Q9UJW7 825 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TAS2R39P59534 338 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 NAA20P61599 178 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 IL5RAQ01344 420 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 IL10RBQ08334 325 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 TSTD2Q5T7W7 516 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 STX19Q8N4C7 294 aa14.23□□□□□ -0.13
NPHP4-208ENST00000478423 UTP15Q8TED0 518 aaKnown RBP14.23□□□□□ -0.13
NPHP4-208ENST00000478423 BBS4Q96RK4 519 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms