RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CERCAMQ5T4B2 595 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 CCDC81Q6ZN84 652 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 SPOCK2Q92563 424 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 PSKH2Q96QS6 385 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 CINPQ9BW66 212 aaPredicted RBP16.77■□□□□ 0.28
TRIM13-208ENST00000478111 TMEM168Q9H0V1 697 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 CWC15Q9P013 229 aaKnown RBP16.77■□□□□ 0.28
TRIM13-208ENST00000478111 ACSL6Q9UKU0 697 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
TRIM13-208ENST00000478111 TTC24A2A3L6 582 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 A8MX80 341 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 TMX2-CTNND1H3BSU7 103 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 DFFAO00273 331 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 TNFRSF10CO14798 259 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 ELFN1P0C7U0 828 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 GLB1P16278 677 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 DESP17661 470 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 HCAR3P49019 387 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 SCNN1BP51168 640 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 POLR2LP62875 67 aaKnown RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 ZFP36L1Q07352 338 aaKnown RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 SLC10A7Q0GE19 358 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 DPYSQ14117 519 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 HLTFQ14527 1009 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 RFTN1Q14699 578 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 PPP6R3Q5H9R7 873 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 PPP1R2P3Q6NXS1 205 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 TMPRSS9Q7Z410 1059 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 CBARPQ8N350 705 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 FAM46DQ8NEK8 389 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 CCL4L1Q8NHW4 92 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 FNIP1Q8TF40 1166 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 SP110Q9HB58 689 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 ATXN7L1Q9ULK2 861 aaPredicted RBP16.76■□□□□ 0.27
TRIM13-208ENST00000478111 SPTA1P02549 2419 aa16.76■□□□□ 0.27
TRIM13-208ENST00000478111 ZFC3H1O60293 1989 aaKnown RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 CACNB4O00305 520 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 DAPK3O43293 454 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 LRCH4O75427 683 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 PEX11BO96011 259 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 FUCA1P04066 466 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 PNLIPP16233 465 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 CR2P20023 1033 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 AP1S1P61966 158 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 TGIF1Q15583 401 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 E4F1Q66K89 784 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 PNCKQ6P2M8 343 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 ZNF571Q7Z3V5 609 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 SPRED1Q7Z699 444 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 TAF8Q7Z7C8 310 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 CCNJLQ8IV13 435 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 PSTKQ8IV42 348 aaKnown RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 Q8N9G6 341 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 COQ10AQ96MF6 247 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 TMEM74Q96NL1 305 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 CCNL2Q96S94 520 aaPredicted RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 STRADBQ9C0K7 418 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 HAUS4Q9H6D7 363 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 CYP4F12Q9HCS2 524 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
TRIM13-208ENST00000478111 B4GALT6Q9UBX8 382 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 RNF215Q9Y6U7 377 aa16.75■□□□□ 0.27
TRIM13-208ENST00000478111 LRRC53A6NM62 1247 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 HTRA2O43464 458 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 PRPSAP2O60256 369 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 RNF8O76064 485 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 FTLP02792 175 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 GZMAP12544 262 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 KELP23276 732 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 B4GALNT1Q00973 533 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 SRSF6Q13247 344 aaKnown RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 LBRQ14739 615 aaKnown RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 C14orf28Q4W4Y0 310 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 C17orf82Q86X59 251 aaPredicted RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 NRROSQ86YC3 692 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 SLITRK4Q8IW52 837 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 PGBD5Q8N414 524 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 ZNF599Q96NL3 588 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 SPATS2LQ9NUQ6 558 aaKnown RBP16.74■□□□□ 0.27
TRIM13-208ENST00000478111 ETNK2Q9NVF9 386 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 LRIT1Q9P2V4 623 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 SEPT3Q9UH03 358 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 PCDHGC4Q9Y5F7 938 aa16.74■□□□□ 0.27
TRIM13-208ENST00000478111 SDK2Q58EX2 2172 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 B8ZZF3 427 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 J3QKU1 62 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 DDX3XO00571 662 aaKnown RBP eCLIP16.73■□□□□ 0.277e-7■■□□□ 13.9
TRIM13-208ENST00000478111 NVLO15381 856 aaKnown RBP16.73■□□□□ 0.27
TRIM13-208ENST00000478111 B4GAT1O43505 415 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 TCF4P15884 667 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 ITIH1P19827 911 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 IL1R2P27930 398 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 ETV5P41161 510 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 PRKCIP41743 596 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 RENBPP51606 427 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 ZNF135P52742 658 aaPredicted RBP16.73■□□□□ 0.27
TRIM13-208ENST00000478111 ACOX1Q15067 660 aa16.73■□□□□ 0.27
TRIM13-208ENST00000478111 CNGA3Q16281 694 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms