RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	CYP4F3	Q08477	520 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ARHGEF7	Q14155	803 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ELOC	Q15369	112 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ALG11	Q2TAA5	492 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ODF2	Q5BJF6	829 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	USP45	Q70EL2	814 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	RD3	Q7Z3Z2	195 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	VSIG1	Q86XK7	387 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	SDR16C5	Q8N3Y7	309 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	CCNY	Q8ND76	341 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	SCG3	Q8WXD2	468 aa	Known RBP	13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	MAML1	Q92585	1016 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	TSACC	Q96A04	125 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	SCRN2	Q96FV2	425 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	COQ10A	Q96MF6	247 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	WDR92	Q96MX6	357 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZNF830	Q96NB3	372 aa	Predicted RBP	13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	LRRC61	Q9BV99	259 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	MAK16	Q9BXY0	300 aa	Known RBP	13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	ABCG4	Q9H172	646 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	RBM22	Q9NW64	420 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	4e-7	■■■■■ 34.8
HDAC7-222	ENST00000477937	KL	Q9UEF7	1012 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	PPIL1	Q9Y3C6	166 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	RAI2	Q9Y5P3	530 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937		U3KQA8	63 aa		13.84	□□□□□ -0.19
HDAC7-222	ENST00000477937	RP1	P56715	2156 aa		13.83	□□□□□ -0.19
HDAC7-222	ENST00000477937	ZNF487	B1APH4	448 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	OPA1	O60313	960 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	HEXIM1	O94992	359 aa	Known RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	MT-CO3	P00414	261 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TNF	P01375	233 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	HOXC4	P09017	264 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	KEL	P23276	732 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TRIM23	P36406	574 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	SLC1A1	P43005	524 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	MAGEA1	P43355	309 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	RPIA	P49247	311 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	KIAA1024L	P59773	190 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	GBE1	Q04446	702 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	SLC10A2	Q12908	348 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TCEAL1	Q15170	157 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	NR0B2	Q15466	257 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	CNGA3	Q16281	694 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	CDKN3	Q16667	212 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	LRRC38	Q5VT99	294 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	DENND2C	Q68D51	928 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	ALG1L	Q6GMV1	187 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	ESRP1	Q6NXG1	681 aa	Known RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	PNCK	Q6P2M8	343 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	LVRN	Q6Q4G3	990 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TC2N	Q8N9U0	490 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TPCN2	Q8NHX9	752 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	IFI44	Q8TCB0	444 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	HDAC11	Q96DB2	347 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	NXPE2	Q96DL1	559 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	NUS1	Q96E22	293 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	BOC	Q9BWV1	1114 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	CLPB	Q9H078	707 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	DDX56	Q9NY93	547 aa	Known RBP	13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	DTL	Q9NZJ0	730 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	TTLL3	Q9Y4R7	772 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	WDFY3	Q8IZQ1	3526 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	IGF2R	P11717	2491 aa		13.83	□□□□□ -0.2
HDAC7-222	ENST00000477937	CPED1	A4D0V7	1026 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	EME2	A4GXA9	379 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	C3orf70	A6NLC5	250 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	PSMD11	O00231	422 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	PDE2A	O00408	941 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	YY2	O15391	372 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	PDHA1	P08559	390 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	ZFX	P17010	805 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	GM2A	P17900	193 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	CA4	P22748	312 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	NOP2	P46087	812 aa	Known RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	EPHB1	P54762	984 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	DSC2	Q02487	901 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	C6orf132	Q5T0Z8	1188 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	GKN2	Q86XP6	184 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	RHOT1	Q8IXI2	618 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	CCDC13	Q8IYE1	715 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	CBARP	Q8N350	705 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	DCBLD1	Q8N8Z6	715 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	OR56A4	Q8NGH8	313 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	LRRN4	Q8WUT4	740 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	PIH1D2	Q8WWB5	315 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	FUBP1	Q96AE4	644 aa	Known RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	MCCC1	Q96RQ3	725 aa	Predicted RBP	13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	NRSN2	Q9GZP1	204 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	HEY1	Q9Y5J3	304 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	AK5	Q9Y6K8	562 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	DGKB	Q9Y6T7	804 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	ADAMTS20	P59510	1910 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	DMXL2	Q8TDJ6	3036 aa		13.82	□□□□□ -0.2
HDAC7-222	ENST00000477937	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.81	□□□□□ -0.2
HDAC7-222	ENST00000477937	TMEM202	A6NGA9	273 aa		13.81	□□□□□ -0.2
HDAC7-222	ENST00000477937	APOL1	O14791	398 aa		13.81	□□□□□ -0.2
HDAC7-222	ENST00000477937	TNFRSF10C	O14798	259 aa		13.81	□□□□□ -0.2

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