RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TBC1D3DA0A087WVF3 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3IA0A087WXS9 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3EA0A087X179 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3KA0A087X1G2 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3FA6NER0 549 aaPredicted RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 PRR23AA6NEV1 266 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 METTL12A8MUP2 240 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3LB9A6J9 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 NEMP1O14524 444 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 AURKAO14965 403 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 NDUFS2O75306 463 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 SEC31AO94979 1220 aaKnown RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 PCDH8O95206 1070 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3HP0C7X1 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 CYP2A6P11509 494 aaPredicted RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 C6P13671 934 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TNNT3P45378 269 aaPredicted RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 LMAN1P49257 510 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 LIG3P49916 1009 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 RPS21P63220 83 aaKnown RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 SPDYCQ5MJ68 293 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 IZUMO3Q5VZ72 239 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3GQ6DHY5 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3CQ6IPX1 549 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 CCDC70Q6NSX1 233 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 LYSMD3Q7Z3D4 306 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 PPIL6Q8IXY8 311 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TBC1D3Q8IZP1 549 aaPredicted RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 TTC30BQ8N4P2 665 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 SEC14L1Q92503 715 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 BIRC7Q96CA5 298 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 SNF8Q96H20 258 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 COQ10AQ96MF6 247 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 C1QTNF2Q9BXJ5 285 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 PIH1D1Q9NWS0 290 aaKnown RBP19.98■□□□□ 0.79
ACTB-210ENST00000477812 R4GN57 208 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 LRRK1Q38SD2 2015 aa19.98■□□□□ 0.79
ACTB-210ENST00000477812 TRPM6Q9BX84 2022 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 SPAG17Q6Q759 2223 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 IGLON5A6NGN9 336 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 EFCAB8A8MWE9 144 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 MMP20O60882 483 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 C1SP09871 688 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 ZNF30P17039 623 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 MAGEA3P43357 314 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 STC1P52823 247 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 TERF1P54274 439 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 PTSQ03393 145 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 CDH17Q12864 832 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 HIBCHQ6NVY1 386 aaPredicted RBP19.97■□□□□ 0.79
ACTB-210ENST00000477812 HSD11B1LQ7Z5J1 315 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 CAND1Q86VP6 1230 aaKnown RBP19.97■□□□□ 0.79
ACTB-210ENST00000477812 HOOK3Q86VS8 718 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 TMEFF1Q8IYR6 380 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 CXorf40AQ8TE69 158 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 HSPA12BQ96MM6 686 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 SRPK1Q96SB4 655 aaKnown RBP19.97■□□□□ 0.79
ACTB-210ENST00000477812 TRIM31Q9BZY9 425 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 EPC1Q9H2F5 836 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 TRABDQ9H4I3 376 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 EBF2Q9HAK2 575 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 GRHL1Q9NZI5 618 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 HACD3Q9P035 362 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 SHOC2Q9UQ13 582 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 SNX24Q9Y343 169 aa19.97■□□□□ 0.79
ACTB-210ENST00000477812 MYLKQ15746 1914 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 C1orf232A0A0U1RR37 186 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 PSMD11O00231 422 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 MAP3K13O43283 966 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 CLDN7O95471 211 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 ELFN1P0C7U0 828 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 PTGER3P43115 390 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 SLC7A5Q01650 507 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 MORF4L2Q15014 288 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 AGERQ15109 404 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 LRRC8BQ6P9F7 803 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 PPP1R21Q6ZMI0 780 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 LPCAT2Q7L5N7 544 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 TMC3Q7Z5M5 1100 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 DEFB119Q8N690 84 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 ASB12Q8WXK4 309 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 TNRC6BQ9UPQ9 1833 aaKnown RBP19.96■□□□□ 0.79
ACTB-210ENST00000477812 GPR179Q6PRD1 2367 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 USP34Q70CQ2 3546 aa19.96■□□□□ 0.79
ACTB-210ENST00000477812 DOCK9Q9BZ29 2069 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 FSBPO95073 299 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 MLNP12872 115 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 TPH1P17752 444 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 MAT2AP31153 395 aaKnown RBP19.95■□□□□ 0.78
ACTB-210ENST00000477812 PTPN5P54829 565 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 DRG2P55039 364 aaKnown RBP19.95■□□□□ 0.78
ACTB-210ENST00000477812 SIM2Q14190 667 aaPredicted RBP19.95■□□□□ 0.78
ACTB-210ENST00000477812 GLE1Q53GS7 698 aaKnown RBP19.95■□□□□ 0.78
ACTB-210ENST00000477812 ZC3H14Q6PJT7 736 aaKnown RBP19.95■□□□□ 0.78
ACTB-210ENST00000477812 RFLNAQ6ZTI6 216 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 TECPR1Q7Z6L1 1165 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 PCGF5Q86SE9 256 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 BLOC1S5Q8TDH9 187 aa19.95■□□□□ 0.78
ACTB-210ENST00000477812 DNASE2BQ8WZ79 361 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms