RNA–Protein interactions for RNA: ENST00000477794.2

PRKCD-204, Transcript of protein kinase C delta, humanhuman

TSL 3

Gene PRKCD, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-204ENST00000477794 HLTFQ14527 1009 aaKnown RBP eCLIP18.7■□□□□ 0.58
PRKCD-204ENST00000477794 RFTN1Q14699 578 aaPredicted RBP18.7■□□□□ 0.58
PRKCD-204ENST00000477794 LINC00303Q3SY05 128 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 PPP1R2P3Q6NXS1 205 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 NETO2Q8NC67 525 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 USP7Q93009 1102 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 FUBP1Q96AE4 644 aaKnown RBP18.7■□□□□ 0.58
PRKCD-204ENST00000477794 PCMTD1Q96MG8 357 aaPredicted RBP18.7■□□□□ 0.58
PRKCD-204ENST00000477794 MCEEQ96PE7 176 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 GSDMCQ9BYG8 508 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 SP110Q9HB58 689 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 CYP4F12Q9HCS2 524 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 UNC13CQ8NB66 2214 aa18.7■□□□□ 0.58
PRKCD-204ENST00000477794 UBR5O95071 2799 aaPredicted RBP18.7■□□□□ 0.58
PRKCD-204ENST00000477794 A0A1W2PQ67 120 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 TMEM202A6NGA9 273 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 FAM87AP0C7U9 286 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 RENBPP51606 427 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 JAM2P57087 298 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 AP1S1P61966 158 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 NSUN2Q08J23 767 aaKnown RBP eCLIP18.69■□□□□ 0.58
PRKCD-204ENST00000477794 PTP4A2Q12974 167 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 ACOX1Q15067 660 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 ZFAND4Q86XD8 727 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 SLITRK4Q8IW52 837 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 TMEM168Q9H0V1 697 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 VPS16Q9H269 839 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 LRRC19Q9H756 370 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 PDFQ9HBH1 243 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 PHPT1Q9NRX4 125 aaPredicted RBP18.69■□□□□ 0.58
PRKCD-204ENST00000477794 SEPT3Q9UH03 358 aa18.69■□□□□ 0.58
PRKCD-204ENST00000477794 PRSS38A1L453 326 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.68■□□□□ 0.58
PRKCD-204ENST00000477794 J3KR12 359 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 EEF2KO00418 725 aaKnown RBP18.68■□□□□ 0.58
PRKCD-204ENST00000477794 BUB1BO60566 1050 aaPredicted RBP18.68■□□□□ 0.58
PRKCD-204ENST00000477794 MYCLP1P12525 358 aaPredicted RBP18.68■□□□□ 0.58
PRKCD-204ENST00000477794 TRIM23P36406 574 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 AFMIDQ63HM1 303 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 LIPIQ6XZB0 460 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 DPPA4Q7L190 304 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 VASH2Q86V25 355 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 PLA2G15Q8NCC3 412 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 NEK11Q8NG66 645 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 DPYSL5Q9BPU6 564 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 NUP62CLQ9H1M0 184 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 ADNPQ9H2P0 1102 aa18.68■□□□□ 0.58
PRKCD-204ENST00000477794 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TEX33O43247 280 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 ALDH4A1P30038 563 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 GPR3P46089 330 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 PAPOLAP51003 745 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 ZNF135P52742 658 aaPredicted RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TRA2AQ13595 282 aaKnown RBP eCLIP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TBR1Q16650 682 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 AMZ1Q400G9 498 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TMCO4Q5TGY1 634 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 PNCKQ6P2M8 343 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 ZNF574Q6ZN55 896 aaPredicted RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 MON1BQ7L1V2 547 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 DTX1Q86Y01 620 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TSEN2Q8NCE0 465 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 GPBAR1Q8TDU6 330 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 ECHDC3Q96DC8 303 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 CELF6Q96J87 481 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TAAR9Q96RI9 348 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 PCDHB18PQ96TA0 734 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 TRIM4Q9C037 500 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 CARS2Q9HA77 564 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 MRPL40Q9NQ50 206 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 GEMIN8Q9NWZ8 242 aaKnown RBP18.67■□□□□ 0.58
PRKCD-204ENST00000477794 FOXJ2Q9P0K8 574 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 AP4E1Q9UPM8 1137 aa18.67■□□□□ 0.58
PRKCD-204ENST00000477794 AGRPO00253 132 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 TERTO14746 1132 aaKnown RBP18.66■□□□□ 0.58
PRKCD-204ENST00000477794 SUV39H1O43463 412 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 PRKCGP05129 697 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 KRT10P13645 584 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 CCNB1P14635 433 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 RALGDSQ12967 914 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 ENOX1Q8TC92 643 aaKnown RBP18.66■□□□□ 0.58
PRKCD-204ENST00000477794 ZDHHC1Q8WTX9 485 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 NUS1Q96E22 293 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 ASPSCR1Q9BZE9 553 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 SLC25A18Q9H1K4 315 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 SEMA6CQ9H3T2 930 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 RDH14Q9HBH5 336 aa18.66■□□□□ 0.58
PRKCD-204ENST00000477794 TRNAU1APQ9NX07 287 aaKnown RBP18.66■□□□□ 0.58
PRKCD-204ENST00000477794 C9orf172C9J069 976 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 DFFAO00273 331 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 CSTF2P33240 577 aaKnown RBP eCLIP18.65■□□□□ 0.58
PRKCD-204ENST00000477794 HSPA9P38646 679 aaKnown RBP18.65■□□□□ 0.58
PRKCD-204ENST00000477794 ETV5P41161 510 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 SCNN1BP51168 640 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 B4GALNT1Q00973 533 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 IL10RBQ08334 325 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 KRT31Q15323 416 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 BORAQ6PGQ7 559 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 ZNF438Q7Z4V0 828 aa18.65■□□□□ 0.58
PRKCD-204ENST00000477794 ZSWIM9Q86XI8 627 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms