RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SLC12A1Q13621 1099 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PPP2R5DQ14738 602 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 AADACL2Q6P093 401 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 RANBP10Q6VN20 620 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 KCTD8Q6ZWB6 473 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SPATC1Q76KD6 591 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 RHPN2Q8IUC4 686 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CRLF3Q8IUI8 442 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ARID3BQ8IVW6 561 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LRRC71Q8N4P6 559 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 VANGL1Q8TAA9 524 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 NKD2Q969F2 451 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 B3GALT6Q96L58 329 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 TBCBQ99426 244 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 BCL7BQ9BQE9 202 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 TTPALQ9BTX7 342 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CYP4F11Q9HBI6 524 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 STOML2Q9UJZ1 356 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 KCNE2Q9Y6J6 123 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LEUTXA8MZ59 168 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 E5RJQ4 531 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CTDSP2O14595 271 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 KPNA5O15131 536 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 MSCO60682 206 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LPXNO60711 386 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PTP4A3O75365 173 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 TRIM16O95361 564 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LGALS2P05162 132 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PSMA3P25788 255 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SERPINB10P48595 397 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SERPINH1P50454 418 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 VBP1P61758 197 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 GRM1Q13255 1194 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SURF1Q15526 300 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 NRF1Q16656 503 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ZACNQ401N2 412 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 EFCAB12Q6NXP0 572 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ADGRD1Q6QNK2 874 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 C15orf39Q6ZRI6 1047 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 PACRGLQ8N7B6 248 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 RSAD2Q8WXG1 361 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 LPGAT1Q92604 370 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 CCDC120Q96HB5 630 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ZBTB45Q96K62 511 aaPredicted RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 BTN2A3PQ96KV6 586 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 KREMEN1Q96MU8 473 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 RTKNQ9BST9 563 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ABHD16BQ9H3Z7 469 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 COQ10BQ9H8M1 238 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 ZNF556Q9HAH1 456 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SP110Q9HB58 689 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 INTS7Q9NVH2 962 aaKnown RBP12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 GPRC5BQ9NZH0 403 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.37
RTFDC1-207ENST00000477573 COL1A2P08123 1366 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ADGRA2Q96PE1 1338 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 SLC15A5A6NIM6 579 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 H3BMM5 538 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 FSCN2O14926 492 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CALB1P05937 261 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 NPR3P17342 541 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 AP1S2P56377 157 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ERVK-21P61565 698 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PDIA2Q13087 525 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MFSD13AQ14CX5 517 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CCDC142Q17RM4 750 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GRTP1Q5TC63 336 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GARNL3Q5VVW2 1013 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 LETMD1Q6P1Q0 360 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 XKRXQ6PP77 449 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TRAF7Q6Q0C0 670 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TRIM72Q6ZMU5 477 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ADGRF2Q8IZF7 708 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ATAD1Q8NBU5 361 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CMASQ8NFW8 434 aaPredicted RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PDCD6IPQ8WUM4 868 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GLT1D1Q96MS3 346 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CGRRF1Q99675 332 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ACO2Q99798 780 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 CYP4F12Q9HCS2 524 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 SMOXQ9NWM0 555 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 B3GNT2Q9NY97 397 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GLTPQ9NZD2 209 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 KLHL42Q9P2K6 505 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 DPP7Q9UHL4 492 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 GTF2IRD1Q9UHL9 959 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 BAG5Q9UL15 447 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TANC1Q9C0D5 1861 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 PDZK1P1A8MUH7 402 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 ACKR2O00590 384 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 OGTO15294 1046 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 UPK1BO75841 260 aa12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 C4BPAP04003 597 aaKnown RBP12.7□□□□□ -0.38
RTFDC1-207ENST00000477573 TRAPPC2P0DI81 140 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms