RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 TSSK4Q6SA08 328 aa16.23■□□□□ 0.19
VHL-203ENST00000477538 GLT6D1Q7Z4J2 308 aa16.23■□□□□ 0.19
VHL-203ENST00000477538 OR14C36Q8NHC7 312 aa16.23■□□□□ 0.19
VHL-203ENST00000477538 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
VHL-203ENST00000477538 MTRF1LQ9UGC7 380 aaKnown RBP16.23■□□□□ 0.19
VHL-203ENST00000477538 TNRC6BQ9UPQ9 1833 aaKnown RBP16.23■□□□□ 0.19
VHL-203ENST00000477538 PIKFYVEQ9Y2I7 2098 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 A0A0U1RQS6 177 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 C1orf232A0A0U1RR37 186 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 ZNF217O75362 1048 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 SLC4A1P02730 911 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 TDGF1P13385 188 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 ZNF30P17039 623 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 LHCGRP22888 699 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 TNFRSF8P28908 595 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 ECHS1P30084 290 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 CRADDP78560 199 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 DHX9Q08211 1270 aaKnown RBP16.22■□□□□ 0.19
VHL-203ENST00000477538 DMWDQ09019 674 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 NAA30Q147X3 362 aaPredicted RBP16.22■□□□□ 0.19
VHL-203ENST00000477538 BBS9Q3SYG4 887 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 TMEM52BQ4KMG9 183 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 MSS51Q4VC12 460 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 DNAJC21Q5F1R6 531 aaKnown RBP16.22■□□□□ 0.19
VHL-203ENST00000477538 LRRC66Q68CR7 880 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 CRTC1Q6UUV9 634 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 LYSMD3Q7Z3D4 306 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 TSPAN33Q86UF1 283 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 GPR161Q8N6U8 529 aaKnown RBP16.22■□□□□ 0.19
VHL-203ENST00000477538 BRSK1Q8TDC3 778 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 GPR63Q9BZJ6 419 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 FOXP3Q9BZS1 431 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 IL22Q9GZX6 179 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 BTBD1Q9H0C5 482 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 TRABDQ9H4I3 376 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 SGK2Q9HBY8 427 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.22■□□□□ 0.19
VHL-203ENST00000477538 NFU1Q9UMS0 254 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 GON4LQ3T8J9 2241 aa16.22■□□□□ 0.19
VHL-203ENST00000477538 MUC3AQ02505 3323 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 HEATR9A2RTY3 570 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 SDR42E2A6NKP2 422 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 AURKAO14965 403 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 TSPAN6O43657 245 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 BANF1O75531 89 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 PCDH8O95206 1070 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CLDN7O95471 211 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 ELFN1P0C7U0 828 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 OXTRP30559 389 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 ACSL1P33121 698 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CSTF1Q05048 431 aaKnown RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 PDIA2Q13087 525 aaKnown RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 TAF1AQ15573 450 aaPredicted RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 CNGA3Q16281 694 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CDKN3Q16667 212 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CCDC38Q502W7 563 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 LIPIQ6XZB0 460 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CENPUQ71F23 418 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 CCDC25Q86WR0 208 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 MAML2Q8IZL2 1156 aaPredicted RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 MPP5Q8N3R9 675 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 TTC30BQ8N4P2 665 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 EIF1ADQ8N9N8 165 aaKnown RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 PPHLN1Q8NEY8 458 aaKnown RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 CXorf40AQ8TE69 158 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 RLN3Q8WXF3 142 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 SIGLEC10Q96LC7 697 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 RANBP9Q96S59 729 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 FMO2Q99518 471 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 WRAP53Q9BUR4 548 aaKnown RBP16.21■□□□□ 0.19
VHL-203ENST00000477538 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 ZFYVE1Q9HBF4 777 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 PREBQ9HCU5 417 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 SAMD15Q9P1V8 674 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 TCAF1Q9Y4C2 921 aa16.21■□□□□ 0.19
VHL-203ENST00000477538 TBC1D3DA0A087WVF3 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3IA0A087WXS9 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3EA0A087X179 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3KA0A087X1G2 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 IGHV1OR15-9A0A0B4J2B8 117 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 CCDC163A0A0D9SF12 145 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3FA6NER0 549 aaPredicted RBP16.2■□□□□ 0.18
VHL-203ENST00000477538 PRR23AA6NEV1 266 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 LRRC72A6NJI9 287 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 PRR33A8MZF0 331 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3LB9A6J9 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 E7ESA3 106 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 H0Y858 1186 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 EIF3HO15372 352 aaKnown RBP eCLIP16.2■□□□□ 0.18
VHL-203ENST00000477538 LDB2O43679 373 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 GPR37L1O60883 481 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 CRTAMO95727 393 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 SEMA4FO95754 770 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3HP0C7X1 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 ADRA1DP25100 572 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 MCM3P25205 808 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 CD6P30203 668 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 FNTBP49356 437 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 LIG3P49916 1009 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 VSNL1P62760 191 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms