RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	SNX30	Q5VWJ9	437 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NAIF1	Q69YI7	327 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LAIR1	Q6GTX8	287 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ALKBH5	Q6P6C2	394 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LRRC31	Q6UY01	552 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MMS22L	Q6ZRQ5	1243 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	H2AFV	Q71UI9	128 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BEND5	Q7L4P6	421 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	IRF2BP2	Q7Z5L9	587 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KIAA1328	Q86T90	577 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PHF13	Q86YI8	300 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TMC8	Q8IU68	726 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARID3B	Q8IVW6	561 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MFSD6L	Q8IWD5	586 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UBALD2	Q8IYN6	164 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MCOLN2	Q8IZK6	566 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CMTM4	Q8IZR5	234 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPA6	Q8N4T0	437 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF276	Q8N554	614 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF557	Q8N988	423 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	C3orf20	Q8ND61	904 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZMIZ2	Q8NF64	920 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC30A5	Q8TAD4	765 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ITFG1	Q8TB96	612 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC20A1	Q8WUM9	679 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLC25A43	Q8WUT9	341 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SREK1	Q8WXA9	508 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ATP2A3	Q93084	1043 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ELSPBP1	Q96BH3	223 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OTUB2	Q96DC9	234 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MSANTD3	Q96H12	275 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	XPO6	Q96QU8	1125 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PPP1R9B	Q96SB3	815 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPXM1	Q96SM3	734 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UHRF1	Q96T88	793 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TTYH3	Q9C0H2	523 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MFSD1	Q9H3U5	465 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	POFUT1	Q9H488	388 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ZNF334	Q9HCZ1	680 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OXSM	Q9NWU1	459 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DUS2	Q9NX74	493 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DONSON	Q9NYP3	566 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	IL37	Q9NZH6	218 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CTTNBP2NL	Q9P2B4	639 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NCDN	Q9UBB6	729 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MYO1A	Q9UBC5	1043 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CNOT8	Q9UFF9	292 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NOCT	Q9UK39	431 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	AJAP1	Q9UKB5	411 aa	Predicted RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ARHGAP26	Q9UNA1	814 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SORCS3	Q9UPU3	1222 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MRPS17	Q9Y2R5	130 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HBS1L	Q9Y450	684 aa	Known RBP	4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NME7	Q9Y5B8	376 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SPO11	Q9Y5K1	396 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CPQ	Q9Y646	472 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TSC2	P49815	1807 aa		4.65	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SYNJ2BP-COX16	A0A087WUM0	186 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	SIGLEC16	A6NMB1	481 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	YJEFN3	A6XGL0	299 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HEPACAM2	A8MVW5	462 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	HHLA1	C9JL84	531 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		E7ENQ6	273 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289		M0QYT0	321 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MYO1F	O00160	1098 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LEFTY2	O00292	366 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TULP2	O00295	520 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CHAD	O15335	359 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCP110	O43303	1012 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	COCH	O43405	550 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	DAB1	O75553	588 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GRAP2	O75791	330 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MOCS3	O95396	460 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	LATS1	O95835	1130 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	TRUB2	O95900	331 aa	Known RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	OAS1	P00973	400 aa	Known RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CALCA	P01258	141 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	ERBB2	P04626	1255 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	UNG	P13051	313 aa	Predicted RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PDGFRA	P16234	1089 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GPD1	P21695	349 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	BMP5	P22003	454 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PSMA2	P25787	234 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GDI1	P31150	447 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PTGS2	P35354	604 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CETN2	P41208	172 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MATK	P42679	507 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MAGEA1	P43355	309 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GABRB2	P47870	512 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CACNA2D1	P54289	1103 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	GAD2	Q05329	585 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	CCDC173	Q0VFZ6	552 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	KIF5A	Q12840	1032 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	NME3	Q13232	169 aa		4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	PIGH	Q14442	188 aa	Predicted RBP	4.64	□□□□□ -1.67
NSMCE4A-208	ENST00000477289	MTF1	Q14872	753 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms