RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 CATSPER2Q96P56 530 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 OLFM1Q99784 485 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 TRMOQ9BU70 441 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 ACSS2Q9NR19 701 aa16.52■□□□□ 0.23
TMEM53-208ENST00000476724 UXTQ9UBK9 157 aaPredicted RBP16.52■□□□□ 0.23
TMEM53-208ENST00000476724 KIAA1671Q9BY89 1806 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 CASQ2O14958 399 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 AURKAO14965 403 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 KIAA0355O15063 1070 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 CCDC166P0CW27 439 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 PDCD2Q16342 344 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 SIRPB2Q5JXA9 342 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 TCHHL1Q5QJ38 904 aaPredicted RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 RAP1GAP2Q684P5 730 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 FAM45BPQ6NSW5 357 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 FAM45AQ8TCE6 357 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 SPPL2BQ8TCT7 592 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 UCMAQ8WVF2 138 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 IGSF8Q969P0 613 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 PPP1R36Q96LQ0 422 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 NDNQ99608 321 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 KLHL4Q9C0H6 718 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 POLR1EQ9GZS1 481 aaKnown RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 RETREG1Q9H6L5 497 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 TRPC7Q9HCX4 862 aa16.51■□□□□ 0.23
TMEM53-208ENST00000476724 MRPL42Q9Y6G3 142 aaKnown RBP16.51■□□□□ 0.23
TMEM53-208ENST00000476724 SDHDO14521 159 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 PEX1O43933 1283 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SORBS2O94875 1100 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 S1PR4O95977 384 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 LINGO3P0C6S8 592 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 HLA-DPA1P20036 260 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 RPL26P61254 145 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ACVR1Q04771 509 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ART3Q13508 389 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 USP41Q3LFD5 358 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ZNF789Q5FWF6 425 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 C10orf120Q5SQS8 335 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 PTAR1Q7Z6K3 402 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SDCCAG8Q86SQ7 713 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 OR6P1Q8NGX9 317 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 HDAC10Q969S8 669 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SGF29Q96ES7 293 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 FEM1CQ96JP0 617 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 RPRD1AQ96P16 312 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SPATS2LQ9NUQ6 558 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 GTSE1Q9NYZ3 720 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 DLGAP2Q9P1A6 1054 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 RIMKLBQ9ULI2 386 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SLC12A8A0AV02 714 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 A8MT66 165 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 FGF1P05230 155 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 SP100P23497 879 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 OR1D2P34982 312 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 TAF10Q12962 218 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ZFP1Q6P2D0 407 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 RNF111Q6ZNA4 994 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 OTOP2Q7RTS6 562 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 PDSS2Q86YH6 399 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 MIB1Q86YT6 1006 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 PELI3Q8N2H9 469 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 IFT43Q96FT9 208 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 CDRT15Q96T59 188 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 C6orf203Q9P0P8 240 aaPredicted RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 MTRRQ9UBK8 725 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 G3BP2Q9UN86 482 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 PSMD13Q9UNM6 376 aa16.5■□□□□ 0.23
TMEM53-208ENST00000476724 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
TMEM53-208ENST00000476724 ALPK3Q96L96 1907 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 LDB2O43679 373 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 PRAMEF11O60813 436 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 WISP3O95389 354 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-208ENST00000476724 ATF6P18850 670 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 IMPDH1P20839 514 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 OR1E1P30953 314 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 SULT2A1Q06520 285 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 MAPRE2Q15555 327 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 PIGGQ5H8A4 983 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 PPM1LQ5SGD2 360 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 SLC8B1Q6J4K2 584 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 CHSY3Q70JA7 882 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 TMEM126BQ8IUX1 230 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 PGBD5Q8N414 524 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 GPR150Q8NGU9 434 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 GIPC2Q8TF65 315 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 RCN3Q96D15 328 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 MEAF6Q9HAF1 191 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 MRPL40Q9NQ50 206 aaKnown RBP16.49■□□□□ 0.23
TMEM53-208ENST00000476724 UTP6Q9NYH9 597 aaKnown RBP16.49■□□□□ 0.23
TMEM53-208ENST00000476724 PDP2Q9P2J9 529 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 ADAMTS6Q9UKP5 1117 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 EIF4E1BA6NMX2 242 aaKnown RBP16.49■□□□□ 0.23
TMEM53-208ENST00000476724 TBX18O95935 607 aa16.49■□□□□ 0.23
TMEM53-208ENST00000476724 JUNP05412 331 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms