RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GCNT7Q6ZNI0 430 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TAC4Q86UU9 113 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CEP97Q8IW35 865 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CARNMT1Q8N4J0 409 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TMCO5AQ8N6Q1 288 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TSPAN14Q8NG11 270 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FBXO32Q969P5 355 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PSMG2Q969U7 264 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 LRCH3Q96II8 777 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TPD52L3Q96J77 140 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TBL1YQ9BQ87 522 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 NTPCRQ9BSD7 190 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CCDC134Q9H6E4 229 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 IPPQ9Y573 584 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CACNA1HO95180 2353 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LOC100506127A0A0U1RQW1 187 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 C17orf102A2RUQ5 167 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CRTAMO95727 393 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CHEK2O96017 543 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 UQCRBP14927 111 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ADRA1BP35368 520 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MATKP42679 507 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 GABRB2P47870 512 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 RFX3P48380 749 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 PPP3CCP48454 512 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MASP1P48740 699 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SLC5A3P53794 718 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 KCNK10P57789 538 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LILRA4P59901 499 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ACTR3P61158 418 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 IL5RAQ01344 420 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SV2CQ496J9 727 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ATP6AP1LQ52LC2 224 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MARC1Q5VT66 337 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 FAM171A1Q5VUB5 890 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5□□□□□ -1.61
CCDC39-204ENST00000476379 BTN2A1Q7KYR7 527 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 GPR141Q7Z602 305 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 HMGN2P46Q86SG4 172 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CUZD1Q86UP6 607 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SLC22A15Q8IZD6 547 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ANKRD52Q8NB46 1076 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 OR7D4Q8NG98 312 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 PBXIP1Q96AQ6 731 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SKA1Q96BD8 255 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 PYCR2Q96C36 320 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 AURKBQ96GD4 344 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 TMEM109Q9BVC6 243 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 COLEC11Q9BWP8 271 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ZDHHC4Q9NPG8 344 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 POLE4Q9NR33 117 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CXXC1Q9P0U4 656 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 MORF4L1Q9UBU8 362 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CROTQ9UKG9 612 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LRFN2Q9ULH4 789 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 FARP1Q9Y4F1 1045 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 TRIP11Q15643 1979 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ZFHX2Q9C0A1 2572 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 A0A088AWK7 358 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 RGS5O15539 181 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LYPLA2O95372 231 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ALBP02768 609 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 STATHP02808 62 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 FGF3P11487 239 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 SH3BGRP55822 239 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 PURAQ00577 322 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 ROR2Q01974 943 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 VAC14Q08AM6 782 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SLC10A7Q0GE19 358 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 BNIP3Q12983 259 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 DMC1Q14565 340 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LRRC26Q2I0M4 334 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CWF19L1Q69YN2 538 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 OLFML1Q6UWY5 402 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 NET1Q7Z628 596 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 MICU2Q8IYU8 434 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 RNF168Q8IYW5 571 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 CLDN19Q8N6F1 224 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LMNTD1Q8N9Z9 388 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CMASQ8NFW8 434 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 RDM1Q8NG50 284 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MYLIPQ8WY64 445 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 LTB4R2Q9NPC1 389 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 DDX28Q9NUL7 540 aaKnown RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 KIF17Q9P2E2 1029 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 NENFQ9UMX5 172 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ST3GAL5Q9UNP4 418 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SNX8Q9Y5X2 465 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 ACTL7BQ9Y614 415 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 SEC16AO15027 2179 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 CACNA1EQ15878 2313 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 COL11A1P12107 1806 aaPredicted RBP5□□□□□ -1.61
CCDC39-204ENST00000476379 A0A1W2PQH9 124 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 NPEPPSL1A6NEC2 478 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 A8MU76 341 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 PER2O15055 1255 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 GPR182O15218 404 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 MAGEB2O15479 319 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 TIMM44O43615 452 aa5□□□□□ -1.61
CCDC39-204ENST00000476379 KDM1AO60341 852 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms