RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 CLDN6P56747 220 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 DYNLT1P63172 113 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 ZBTB17Q13105 803 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 MTM1Q13496 603 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 ACOX1Q15067 660 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 LLGL1Q15334 1064 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 SMAD1Q15797 465 aaKnown RBP21.22■□□□□ 0.99
LIME1-204ENST00000476183 TSPAN33Q86UF1 283 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 PHACTR4Q8IZ21 702 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 CBARPQ8N350 705 aaPredicted RBP21.22■□□□□ 0.99
LIME1-204ENST00000476183 CNTD1Q8N815 330 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 SCRN2Q96FV2 425 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 MCCC1Q96RQ3 725 aaPredicted RBP21.22■□□□□ 0.99
LIME1-204ENST00000476183 IL12RB2Q99665 862 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 PPIL1Q9Y3C6 166 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 DUSP10Q9Y6W6 482 aa21.22■□□□□ 0.99
LIME1-204ENST00000476183 LRP4O75096 1905 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 LY6G6EA0A0G2JKS1 128 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 NEMP2A6NFY4 417 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 AQP9O43315 295 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 GCATO75600 419 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 C1SP09871 688 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 ALPIP09923 528 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 KRT10P13645 584 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 ACP1P24666 158 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 IFI35P80217 286 aaPredicted RBP21.21■□□□□ 0.99
LIME1-204ENST00000476183 ADCY2Q08462 1091 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 NFATC4Q14934 902 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 KCTD16Q68DU8 428 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 C11orf63Q6NUN7 778 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 B4GALNT4Q76KP1 1039 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 HSD11B1LQ7Z5J1 315 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 TMEM139Q8IV31 216 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 ACRBPQ8NEB7 543 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 TPCN2Q8NHX9 752 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 LMX1AQ8TE12 382 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 LRRC61Q9BV99 259 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 TDRD1Q9BXT4 1180 aaKnown RBP21.21■□□□□ 0.99
LIME1-204ENST00000476183 APOBEC3BQ9UH17 382 aaKnown RBP21.21■□□□□ 0.99
LIME1-204ENST00000476183 CSNK1G3Q9Y6M4 447 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 U3KQA8 63 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 DMXL2Q8TDJ6 3036 aa21.21■□□□□ 0.99
LIME1-204ENST00000476183 ZZEF1O43149 2961 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 FAM149AA5PLN7 773 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 PRLP01236 227 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 MMP2P08253 660 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 CYP2A6P11509 494 aaPredicted RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 ZFXP17010 805 aaPredicted RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 CES1P23141 567 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 AP1B1Q10567 949 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 C1orf61Q13536 156 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 PDK1Q15118 436 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 ST3GAL2Q16842 350 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 ALG11Q2TAA5 492 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 ODF2Q5BJF6 829 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 PRRT3Q5FWE3 981 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 DENND2CQ68D51 928 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 SPOCD1Q6ZMY3 1216 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 KRT35Q92764 455 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 TSACCQ96A04 125 aaPredicted RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 FUBP1Q96AE4 644 aaKnown RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 APOLD1Q96LR9 279 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 ANP32EQ9BTT0 268 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 CEP41Q9BYV8 373 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 LACRTQ9GZZ8 138 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 LUC7LQ9NQ29 371 aaKnown RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 SAE1Q9UBE0 346 aaPredicted RBP21.2■□□□□ 0.98
LIME1-204ENST00000476183 CHKBQ9Y259 395 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 ASXL3Q9C0F0 2248 aa21.2■□□□□ 0.98
LIME1-204ENST00000476183 CELA2BP08218 269 aaPredicted RBP21.19■□□□□ 0.98
LIME1-204ENST00000476183 ALPPL2P10696 532 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 HNF1BP35680 557 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 TRIM23P36406 574 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 ETV3P41162 512 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 PPARDQ03181 441 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 DEFB133Q30KQ1 61 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 HS1BP3Q53T59 392 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 FAXCQ5TGI0 409 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
LIME1-204ENST00000476183 ENPP7Q6UWV6 458 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 USP45Q70EL2 814 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 KATNAL2Q8IYT4 538 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 GALNT15Q8N3T1 639 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 FAM181AQ8N9Y4 354 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 KDF1Q8NAX2 398 aaPredicted RBP21.19■□□□□ 0.98
LIME1-204ENST00000476183 BTN2A2Q8WVV5 523 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 NUS1Q96E22 293 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 DUSP23Q9BVJ7 150 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 CLPBQ9H078 707 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 SPASTQ9UBP0 616 aa21.19■□□□□ 0.98
LIME1-204ENST00000476183 A0A0J9YYE9 177 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 CST8O60676 142 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 TRBC1P01850 177 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 CKMT1AP12532 417 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 PECAM1P16284 738 aaPredicted RBP21.18■□□□□ 0.98
LIME1-204ENST00000476183 TSHRP16473 764 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 NFKBIAP25963 317 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 HTR1BP28222 390 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 CDC25BP30305 580 aa21.18■□□□□ 0.98
LIME1-204ENST00000476183 CD86P42081 329 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms