RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 WT1P19544 449 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 KELP23276 732 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 EEF1GP26641 437 aaKnown RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 RGRP47804 291 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 MAZP56270 477 aaKnown RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 RALGDSQ12967 914 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 PTP4A2Q12974 167 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 C16orf72Q14CZ0 275 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 ACOX1Q15067 660 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 TMEM164Q5U3C3 297 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 DNAJC24Q6P3W2 148 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 XKR5Q6UX68 686 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 SRLQ86TD4 932 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 SLITRK4Q8IW52 837 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 RCBTB1Q8NDN9 531 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 KIAA1524Q8TCG1 905 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 TUBGCP5Q96RT8 1024 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 PCDHB18PQ96TA0 734 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 ANP32EQ9BTT0 268 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 CINPQ9BW66 212 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 WDR26Q9H7D7 661 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 PDFQ9HBH1 243 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 A0A1W2PQC6 194 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 PRSS38A1L453 326 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 WASH4PA8MWX3 477 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 EPHB6O15197 1021 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 NUDT21O43809 227 aaKnown RBP14.04□□□□□ -0.16
CCDC78-209ENST00000474647 PRAMEF11O60813 436 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 PALMO75781 387 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 SFTPCP11686 197 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 ITGB6P18564 788 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 ERCC5P28715 1186 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-209ENST00000474647 ALDH4A1P30038 563 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 GSCP56915 257 aaPredicted RBP14.04□□□□□ -0.16
CCDC78-209ENST00000474647 JAM2P57087 298 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 OR1D5P58170 312 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 BCL2L1Q07817 233 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 BIRC2Q13490 618 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 CLEC16AQ2KHT3 1053 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 OGFOD3Q6PK18 319 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 LIPIQ6XZB0 460 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 PIM3Q86V86 326 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 TSEN2Q8NCE0 465 aaKnown RBP14.04□□□□□ -0.16
CCDC78-209ENST00000474647 HTR3CQ8WXA8 447 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 LGR4Q9BXB1 951 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 ZMYND15Q9H091 742 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 CLSTN2Q9H4D0 955 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 LRRC19Q9H756 370 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 CARS2Q9HA77 564 aaKnown RBP14.04□□□□□ -0.16
CCDC78-209ENST00000474647 GPATCH2LQ9NWQ4 482 aa14.04□□□□□ -0.16
CCDC78-209ENST00000474647 GOLGA6CA6NDK9 693 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 GOLGA6BA6NDN3 693 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 ARHGAP42A6NI28 874 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 SIGLEC16A6NMB1 481 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 RHPN2P1A8MT19 583 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 STMND1H3BQB6 276 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 SUV39H1O43463 412 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 CPNE6O95741 557 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 TPM2P07951 284 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 GOLGA6DP0CG33 693 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 DESP17661 470 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 CD82P27701 267 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 STAT1P42224 750 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 PAPOLAP51003 745 aaKnown RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 ZNF143P52747 638 aaPredicted RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 AIF1P55008 147 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 RPL7AP62424 266 aaKnown RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 B4GALNT1Q00973 533 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 TSR1Q2NL82 804 aaKnown RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 DENND2CQ68D51 928 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 DTX1Q86Y01 620 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 PELI3Q8N2H9 469 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 ZDHHC1Q8WTX9 485 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 PCMTD1Q96MG8 357 aaPredicted RBP14.03□□□□□ -0.16
CCDC78-209ENST00000474647 NUDT22Q9BRQ3 303 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 SLC39A8Q9C0K1 460 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 SP110Q9HB58 689 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 GOLGA6AQ9NYA3 693 aa14.03□□□□□ -0.16
CCDC78-209ENST00000474647 CFAP69A5D8W1 941 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 DFFAO00273 331 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 EEF2KO00418 725 aaKnown RBP14.02□□□□□ -0.17
CCDC78-209ENST00000474647 TNFRSF10CO14798 259 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 MYCLP1P12525 358 aaPredicted RBP14.02□□□□□ -0.17
CCDC78-209ENST00000474647 CCL4P13236 92 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 CCNB1P14635 433 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 PPM1FP49593 454 aaPredicted RBP14.02□□□□□ -0.17
CCDC78-209ENST00000474647 ATP1A2P50993 1020 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 NDST2P52849 883 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 CLCA4Q14CN2 919 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.17
CCDC78-209ENST00000474647 FKBP15Q5T1M5 1219 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 DCUN1D2Q6PH85 259 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 DPPA4Q7L190 304 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 MON1BQ7L1V2 547 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 IL22RA1Q8N6P7 574 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 PMEPA1Q969W9 287 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 NUS1Q96E22 293 aa14.02□□□□□ -0.17
CCDC78-209ENST00000474647 CCDC74BQ96LY2 380 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms