RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PPIL1Q9Y3C6 166 aa18.62■□□□□ 0.57
COL7A1-209ENST00000474432 DGKBQ9Y6T7 804 aa18.62■□□□□ 0.57
COL7A1-209ENST00000474432 ARHGEF17Q96PE2 2063 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 FZD6O60353 706 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 HEXIM1O94992 359 aaKnown RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 PGLSO95336 258 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 HTR1BP28222 390 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 SERPINB6P35237 376 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 GARSP41250 739 aaKnown RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 MMP13P45452 471 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 PDX1P52945 283 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 ANKRD20A8PQ5CZ79 823 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 RALGPS1Q5JS13 557 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 ESRP1Q6NXG1 681 aaKnown RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 LVRNQ6Q4G3 990 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 RD3Q7Z3Z2 195 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 PQLC3Q8N755 202 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 KYQ8NBH2 561 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 OR8K1Q8NGG5 319 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 PIH1D2Q8WWB5 315 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 DCBLD2Q96PD2 775 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 DEPDC7Q96QD5 511 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 MCCC1Q96RQ3 725 aaPredicted RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 CHP1Q99653 195 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 ABCG4Q9H172 646 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 MRPL40Q9NQ50 206 aaKnown RBP18.61■□□□□ 0.57
COL7A1-209ENST00000474432 EVA1BQ9NVM1 165 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 CTTNBP2NLQ9P2B4 639 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 UVRAGQ9P2Y5 699 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 KLQ9UEF7 1012 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 RABGEF1Q9UJ41 708 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 PADI4Q9UM07 663 aa18.61■□□□□ 0.57
COL7A1-209ENST00000474432 LOC400499M0QZD8 3231 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 A0A0U1RQS6 177 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 A0A1W2PQ67 120 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 NPIPB15A6NHN6 443 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-209ENST00000474432 USP12O75317 370 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 MAP3K6O95382 1288 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 CPP00450 1065 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 FUCA1P04066 466 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 MPOP05164 745 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 PDHA1P08559 390 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 H2AFZP0C0S5 128 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 PTMSP20962 102 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 VIPR1P32241 457 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SSR1P43307 286 aaKnown RBP18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SLC10A2Q12908 348 aaPredicted RBP18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ACOX1Q15067 660 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ELOCQ15369 112 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 HADHQ16836 314 aaKnown RBP18.6■□□□□ 0.57
COL7A1-209ENST00000474432 TBC1D25Q3MII6 688 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SPECC1LQ69YQ0 1117 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ALG1LQ6GMV1 187 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 PNCKQ6P2M8 343 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 H2AFVQ71UI9 128 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 HSD11B1LQ7Z5J1 315 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 TSPAN33Q86UF1 283 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 LRRC49Q8IUZ0 686 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SFTPA2Q8IWL1 248 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 OR56A4Q8NGH8 313 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 PDCD6IPQ8WUM4 868 aaKnown RBP18.6■□□□□ 0.57
COL7A1-209ENST00000474432 LRRN4Q8WUT4 740 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 FGF11Q92914 225 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SCRN2Q96FV2 425 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 TSGA13Q96PP4 275 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ZNF670Q9BS34 389 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 NT5MQ9NPB1 228 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 PHTF1Q9UMS5 762 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ENTPD2Q9Y5L3 495 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 ATRXP46100 2492 aa18.6■□□□□ 0.57
COL7A1-209ENST00000474432 SSU72P8A0A1W2PR75 194 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 DXOO77932 396 aaKnown RBP18.59■□□□□ 0.57
COL7A1-209ENST00000474432 ALPIP09923 528 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 GJC1P36383 396 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 LSSP48449 732 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 RPIAP49247 311 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 GBE1Q04446 702 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 SOWAHCQ53LP3 525 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-209ENST00000474432 RFLNAQ6ZTI6 216 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 VSTM4Q8IW00 320 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 SDR16C5Q8N3Y7 309 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 ARL10Q8N8L6 244 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 GPR156Q8NFN8 814 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 FATE1Q969F0 183 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 DTD2Q96FN9 168 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 PRR11Q96HE9 360 aaPredicted RBP18.59■□□□□ 0.57
COL7A1-209ENST00000474432 HIC2Q96JB3 615 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 SEMA3CQ99985 751 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 CCDC3Q9BQI4 270 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 ASCL3Q9NQ33 180 aa18.59■□□□□ 0.57
COL7A1-209ENST00000474432 PMS2P1A4D2B8 440 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 CACNB4O00305 520 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-209ENST00000474432 NTN3O00634 580 aaPredicted RBP18.58■□□□□ 0.56
COL7A1-209ENST00000474432 TNFRSF10CO14798 259 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 MATN3O15232 486 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 TNFP01375 233 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 TMEM253P0C7T8 217 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 CTSEP14091 401 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 MAN1A1P33908 653 aa18.58■□□□□ 0.56
COL7A1-209ENST00000474432 ETV3P41162 512 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms