RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 HNF1BP35680 557 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MMP12P39900 470 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 P2RY2P41231 377 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ELK3P41970 407 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MAGEA4P43358 317 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 CCR3P51677 355 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SUOXP51687 545 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PMS2P54278 862 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PDE1BQ01064 536 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SEMG2Q02383 582 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ZBTB16Q05516 673 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MTAPQ13126 283 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 FZD5Q13467 585 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 TAF1AQ15573 450 aaPredicted RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 FAM153CQ494X1 144 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PCID2Q5JVF3 399 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PIP5KL1Q5T9C9 394 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 AGBL4Q5VU57 503 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 LRRC66Q68CR7 880 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 DPPA4Q7L190 304 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 LYSMD3Q7Z3D4 306 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 TMC3Q7Z5M5 1100 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 CCNJLQ8IV13 435 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 AADATQ8N5Z0 425 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MDGA1Q8NFP4 955 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 BRSK1Q8TDC3 778 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 CXorf40AQ8TE69 158 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 AENQ8WTP8 325 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 PYROXD1Q8WU10 500 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 UBLCP1Q8WVY7 318 aaPredicted RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 SPOCK2Q92563 424 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 RAB7BQ96AH8 199 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 VOPP1Q96AW1 172 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SCRN2Q96FV2 425 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MRGPRX1Q96LB2 322 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 TTC25Q96NG3 672 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SMIM14Q96QK8 99 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MCCC1Q96RQ3 725 aaPredicted RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 RANBP9Q96S59 729 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 EBNA1BP2Q99848 306 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 NAT9Q9BTE0 207 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 HDAC8Q9BY41 377 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 TRABDQ9H4I3 376 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 VPS37BQ9H9H4 285 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ZFYVE1Q9HBF4 777 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 MRM3Q9HC36 420 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 MAGEE1Q9HCI5 957 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SPATA6Q9NWH7 488 aaPredicted RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 FBXL12Q9NXK8 326 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 B4GALT6Q9UBX8 382 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ZC3H7BQ9UGR2 993 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 SOX13Q9UN79 622 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ITM2BQ9Y287 266 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 NCKAP1Q9Y2A7 1128 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 PKP3Q9Y446 797 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 SPO11Q9Y5K1 396 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.36□□□□□ -1.07
CNN3-205ENST00000474409 RPS6KL1Q9Y6S9 549 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 ZNF318Q5VUA4 2279 aa8.36□□□□□ -1.07
CNN3-205ENST00000474409 FAM237BA0A1B0GVD1 139 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 STX7O15400 261 aaKnown RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 SLC7A4O43246 635 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 BUD23O43709 281 aaKnown RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 SPAG6O75602 509 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 USP1O94782 785 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PCDH8O95206 1070 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 ACSL3O95573 720 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 TTC4O95801 387 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 POLBP06746 335 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 TIMP2P16035 220 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 ZNF30P17039 623 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PAMP19021 973 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 LPOP22079 712 aaPredicted RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 LHCGRP22888 699 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PHBP35232 272 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 DRD3P35462 400 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 ZNF140P52738 457 aaPredicted RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 ADPRHP54922 357 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PRAMEP78395 509 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 TMPRSS15P98073 1019 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 CRYMQ14894 314 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PTPRRQ15256 657 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 CNGA3Q16281 694 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 SPANXN3Q5MJ09 141 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 ARMC3Q5W041 872 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 USP30Q70CQ3 517 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 NLRP9Q7RTR0 991 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 TSPAN33Q86UF1 283 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 FAM124AQ86V42 546 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 RASSF3Q86WH2 238 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 PALM2Q8IXS6 379 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 AGGF1Q8N302 714 aaeCLIP8.35□□□□□ -1.07
CNN3-205ENST00000474409 GSDMBQ8TAX9 411 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 CAVIN3Q969G5 261 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 DNAJC1Q96KC8 554 aaKnown RBP8.35□□□□□ -1.07
CNN3-205ENST00000474409 SIGLEC10Q96LC7 697 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 LYSMD1Q96S90 227 aa8.35□□□□□ -1.07
CNN3-205ENST00000474409 WDR83Q9BRX9 315 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms