RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 AMTP48728 403 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 CXCR3P49682 368 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 CTCFP49711 727 aaPredicted RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 NUDT6P53370 316 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 EIF3BP55884 814 aaKnown RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 RPS3AP61247 264 aaKnown RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 TUBA1BP68363 451 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 RNPS1Q15287 305 aaKnown RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 ALG11Q2TAA5 492 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 LRRC8EQ6NSJ5 796 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 ZNF771Q7L3S4 317 aaPredicted RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 SLC46A3Q7Z3Q1 461 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 PXKQ7Z7A4 578 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 CPLX4Q7Z7G2 160 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 TBC1D26Q86UD7 250 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 DHX40Q8IX18 779 aaKnown RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 KIAA2013Q8IYS2 634 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 MCPH1Q8NEM0 835 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 ZMIZ2Q8NF64 920 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 ETNPPLQ8TBG4 499 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 DUX5Q96PT3 197 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 YME1L1Q96TA2 773 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 SCPEP1Q9HB40 452 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 KRT84Q9NSB2 600 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 SPATS2LQ9NUQ6 558 aaKnown RBP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 MKLN1Q9UL63 735 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 CAPN7Q9Y6W3 813 aa3.68□□□□□ -1.82
TMEM50B-208ENST00000474272 DCAF1Q9Y4B6 1507 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 A0A0U1RQF3 1178 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PI4KAP2A4QPH2 592 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 NPIPB11E5RHQ5 1161 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 ASAP2O43150 1006 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 KIF1CO43896 1103 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 SEC14L2O76054 403 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 MMP3P08254 477 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 F7P08709 466 aaPredicted RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 MYZAPP0CAP1 466 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PTPN2P17706 415 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 SRD5A1P18405 259 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 MAPK4P31152 587 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 BSGP35613 385 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 CPOXP36551 454 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PBX3P40426 434 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 EIF5P55010 431 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 HDAC4P56524 1084 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 RPL7AP62424 266 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 POU3F1Q03052 451 aaPredicted RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 TRAF2Q12933 501 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 GRIK3Q13003 919 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 CAPSQ13938 189 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 SF3B4Q15427 424 aaKnown RBP eCLIP3.67□□□□□ -1.826e-8■■■■□ 19.5
TMEM50B-208ENST00000474272 ZRSR1Q15695 479 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 KRT71Q3SY84 523 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 SLC45A4Q5BKX6 768 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 HEPHL1Q6MZM0 1159 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 CDC73Q6P1J9 531 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 NEK10Q6ZWH5 1172 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 LURAP1LQ8IV03 231 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 DENND6AQ8IWF6 608 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 BICD2Q8TD16 824 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 CREB3L4Q8TEY5 395 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 TMEM18Q96B42 140 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 RNF183Q96D59 192 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PABPC5Q96DU9 382 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 ZNF333Q96JL9 665 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 ITPAQ9BY32 194 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 NPFFR1Q9GZQ6 430 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PDCL3Q9H2J4 239 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 INTS6Q9UL03 887 aaKnown RBP3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 A4GNTQ9UNA3 340 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 CARD8Q9Y2G2 431 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 RAI2Q9Y5P3 530 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 PSAT1Q9Y617 370 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 SCINQ9Y6U3 715 aa3.67□□□□□ -1.82
TMEM50B-208ENST00000474272 IGLV5-52A0A0A0MRZ9 124 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 A0A1W2PQF6 199 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 KLRF2D3W0D1 207 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 KLK8O60259 260 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 ATP2C2O75185 946 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 KRT36O76013 467 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 MLYCDO95822 493 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 SCGB1D1O95968 90 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 HSPA1AP0DMV8 641 aaKnown RBP3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 HSPA1BP0DMV9 641 aaKnown RBP3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 LAMP2P13473 410 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 NAGAP17050 411 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 ZNF8P17098 575 aaPredicted RBP3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 GNLYP22749 145 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 CASP2P42575 452 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 CDH12P55289 794 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 OLR1P78380 273 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 SETQ01105 290 aaPredicted RBP3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 DDR1Q08345 913 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 FAM27E3Q08E93 113 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 TMEM115Q12893 351 aaPredicted RBP3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 RUNX2Q13950 521 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 VEPH1Q14D04 833 aa3.66□□□□□ -1.82
TMEM50B-208ENST00000474272 PLEKHO1Q53GL0 409 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms