RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TM9SF2Q99805 663 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 HEMGNQ9BXL5 484 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MRPL1Q9BYD6 325 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 TRNAU1APQ9NX07 287 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 RHBDL2Q9NX52 303 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PFASO15067 1338 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 SPINT1O43278 529 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PRDM1O75626 825 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 KCNK5O95279 499 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 RPLP1P05386 114 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 DARSP14868 501 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CYP2A7P20853 494 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PTAFRP25105 342 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMA5P28066 241 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 HOXC8P31273 242 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MCM7P33993 719 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CTNNB1P35222 781 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMB10P40306 273 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ARHGAP25P42331 645 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ACADVLP49748 655 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CDH6P55285 790 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CDK18Q07002 472 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 SCN1BQ07699 218 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 LCP2Q13094 533 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 TNFAIP1Q13829 316 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ARHGAP44Q17R89 818 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PGS1Q32NB8 556 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PCGF3Q3KNV8 242 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 SV2CQ496J9 727 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 NKAIN1Q4KMZ8 207 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ZNF628Q5EBL2 1059 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 C6orf163Q5TEZ5 329 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CDCP2Q5VXM1 449 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 NAA35Q5VZE5 725 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MRPL14Q6P1L8 145 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CLEC17AQ6ZS10 378 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 HTR3DQ70Z44 454 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MIB1Q86YT6 1006 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MB21D2Q8IYB1 491 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ARFGAP1Q8N6T3 406 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 USHBP1Q8N6Y0 703 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 POGLUT1Q8NBL1 392 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ZDHHC1Q8WTX9 485 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ISG20Q96AZ6 181 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 MRPL38Q96DV4 380 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 REXO5Q96IC2 774 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ELMO2Q96JJ3 720 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 HEPHQ9BQS7 1158 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 CALN1Q9BXU9 219 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 FTOQ9C0B1 505 aaKnown RBP eCLIP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 SLITRK6Q9H5Y7 841 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PANK3Q9H999 370 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 TRPC7Q9HCX4 862 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ABCB8Q9NUT2 735 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 TBC1D23Q9NUY8 699 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 ZSCAN32Q9NX65 697 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 OGDHLQ9ULD0 1010 aa6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 PACSIN2Q9UNF0 486 aaPredicted RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 SAMHD1Q9Y3Z3 626 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM32AQ9Y421 112 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-208ENST00000474246 DCHS1Q96JQ0 3298 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 GVINP1Q7Z2Y8 2422 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 WRBO00258 174 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 RASGRF2O14827 1237 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PFDN1O60925 122 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 RPP40O75818 363 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 KRT36O76013 467 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 IL18RAPO95256 599 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 RASAL1O95294 804 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PDGFBP01127 241 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 CLEC3BP05452 202 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ITGAVP06756 1048 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 RPS17P08708 135 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 GSTT2P0CG29 244 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 GSTT2BP0CG30 244 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ESRRAP11474 423 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PABPC1P11940 636 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ETS1P14921 441 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ITGA2P17301 1181 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ADRA1DP25100 572 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 GRIA4P48058 902 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC9A3P48764 834 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 IRAK1P51617 712 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 OAZ1P54368 228 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SHC2P98077 582 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 CAPRIN1Q14444 709 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SNX17Q15036 470 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 KRT80Q6KB66 452 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 TMEM270Q6UE05 265 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 RBM43Q6ZSC3 357 aaKnown RBP6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 FBN3Q75N90 2809 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 ANO5Q75V66 913 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 PLPPR4Q7Z2D5 763 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 NUDT13Q86X67 352 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 FAM131BQ86XD5 332 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 CCDC36Q8IYA8 594 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 SLC25A41Q8N5S1 370 aa6.12□□□□□ -1.43
SMARCE1-208ENST00000474246 GPR161Q8N6U8 529 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms