RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TUBP50607 506 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 OLR1P78380 273 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 MPP1Q00013 466 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DRAP1Q14919 205 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ASIC2Q16515 512 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ATP13A5Q4VNC0 1218 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 UBAP2Q5T6F2 1119 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 GGNBP1Q5YKI7 109 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 NADSYN1Q6IA69 706 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 LCTLQ6UWM7 567 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 KRBA2Q6ZNG9 492 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 TMTC3Q6ZXV5 915 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 R3HCC1LQ7Z5L2 792 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ZC3HC1Q86WB0 502 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DIS3L2Q8IYB7 885 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 HACE1Q8IYU2 909 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DSELQ8IZU8 1212 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ARRDC2Q8TBH0 407 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ADAMTS14Q8WXS8 1223 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 HDAC2Q92769 488 aaKnown RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 CCDC34Q96HJ3 373 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 TMEM68Q96MH6 324 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 CAMK1GQ96NX5 476 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DUX5Q96PT3 197 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 FAM110AQ9BQ89 295 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 C17orf75Q9HAS0 396 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DIAPH3Q9NSV4 1193 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 DLGAP2Q9P1A6 1054 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 FBXO9Q9UK97 447 aaPredicted RBP3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 NFS1Q9Y697 457 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 STON1Q9Y6Q2 735 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 ITIH6Q6UXX5 1313 aa3.35□□□□□ -1.87
ECHDC1-213ENST00000474240 TTC3P53804 2025 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 IGLV5-37A0A075B6J1 123 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A087X0M5 115 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 A0A1B0GX30 115 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 DENND3A2RUS2 1198 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 LINC01553A4QN01 128 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 LDLRAD4O15165 306 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 HSPA12AO43301 675 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 MBD4O95243 580 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 IPO7O95373 1038 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 DDX58O95786 925 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 CD53P19397 219 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 MAN1A1P33908 653 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 FASLGP48023 281 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 METAP2P50579 478 aaKnown RBP eCLIP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 EFNA5P52803 228 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 DSCR9P59020 149 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 TUBA1BP68363 451 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 TFAP4Q01664 338 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 POU3F1Q03052 451 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 AMZ1Q400G9 498 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 KCTD18Q6PI47 426 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 RSRC2Q7L4I2 434 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 CACNA2D4Q7Z3S7 1137 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 WDR63Q8IWG1 891 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 HUS1BQ8NHY5 278 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 WFIKKN2Q8TEU8 576 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 POMGNT1Q8WZA1 660 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 NEUROG1Q92886 237 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 GTF3C6Q969F1 213 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 SLC41A2Q96JW4 573 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 KXD1Q9BQD3 176 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 TMEM47Q9BQJ4 181 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 OLA1Q9NTK5 396 aaKnown RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 EHD2Q9NZN4 543 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 MDFICQ9P1T7 246 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 UBA2Q9UBT2 640 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 SLCO3A1Q9UIG8 710 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 TTC7AQ9ULT0 858 aaPredicted RBP3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 CDC14AQ9UNH5 594 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 NAALADL1Q9UQQ1 740 aa3.34□□□□□ -1.87
ECHDC1-213ENST00000474240 IGLV5-52A0A0A0MRZ9 124 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 CPED1A4D0V7 1026 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 NPIPB15A6NHN6 443 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 BTBD18B2RXH4 712 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC28A2O43868 658 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 PAGE4O60829 102 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 DAB1O75553 588 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 RFPL2O75678 378 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SRCP12931 536 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF182P17025 639 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 MAOAP21397 527 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 PAX3P23760 479 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 HOXC9P31274 260 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SHMT1P34896 483 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 HARS2P49590 506 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SEC61BP60468 96 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 HYAL1Q12794 435 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 KIF5AQ12840 1032 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 LRMPQ12912 555 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 CSTF3Q12996 717 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 GRIK3Q13003 919 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 DCTN2Q13561 401 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 TNFAIP1Q13829 316 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 KIF19Q2TAC6 998 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 XKR9Q5GH70 373 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms