RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FGF3P11487 239 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RHOQP17081 205 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC9A1P19634 815 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CDH5P33151 784 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 UGT1A3P35503 534 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 MMP12P39900 470 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PPP1R2P41236 205 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 LIG3P49916 1009 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 ATP1A2P50993 1020 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 SUOXP51687 545 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 OR1D5P58170 312 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 KIAA1024LP59773 190 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 B4GALNT1Q00973 533 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 ELP6Q0PNE2 266 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 MTM1Q13496 603 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 ARHGEF7Q14155 803 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 NR1D2Q14995 579 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 EXOC3L4Q17RC7 722 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RAB6CQ53S08 254 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 C2CD6Q53TS8 623 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM72AQ5TYM5 149 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 SPECC1LQ69YQ0 1117 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM72DQ6L9T8 149 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RWDD4Q6NW29 188 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TAF8Q7Z7C8 310 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PIM3Q86V86 326 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM72BQ86X60 149 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 IRF2BP1Q8IU81 584 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 IL22RA1Q8N6P7 574 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 NETO2Q8NC67 525 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PLA2G15Q8NCC3 412 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 ATL2Q8NHH9 583 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CCL4L1Q8NHW4 92 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 C9orf43Q8TAL5 461 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 GPBAR1Q8TDU6 330 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 FUBP1Q96AE4 644 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 C18orf8Q96DM3 657 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 HMCESQ96FZ2 354 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 POM121Q96HA1 1249 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 SLC45A3Q96JT2 553 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CCDC74BQ96LY2 380 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CFAP57Q96MR6 1250 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CATSPER2Q96P56 530 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TAAR9Q96RI9 348 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 NUDT22Q9BRQ3 303 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 RAB6CQ9H0N0 254 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM168Q9H0V1 697 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 CDH19Q9H159 772 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 MAGEH1Q9H213 219 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 NOL6Q9H6R4 1146 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PCDH12Q9NPG4 1184 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 MRPL40Q9NQ50 206 aaKnown RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 AKAP7Q9P0M2 348 aaPredicted RBP5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 LHX3Q9UBR4 397 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 OR12D3Q9UGF7 316 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 DNAI1Q9UI46 699 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 TMEM59LQ9UK28 342 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 HPCAL4Q9UM19 191 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 PLAAQ9Y263 795 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 B3GALT1Q9Y5Z6 326 aa5.16□□□□□ -1.58
SNRNP40-204ENST00000474025 POLQO75417 2590 aa5.15□□□□□ -1.58
SNRNP40-204ENST00000474025 NF1P21359 2839 aa5.15□□□□□ -1.58
SNRNP40-204ENST00000474025 FAM170AA1A519 330 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 BLACEA4D250 179 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ZNF891A8MT65 544 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 GOLGA8SH3BPF8 625 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CACNB4O00305 520 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 FOXN3O00409 490 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 TNFRSF10CO14798 259 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 NKX2-8O15522 239 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 BUB1O43683 1085 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 KDELR3O43731 214 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 DUX1O43812 170 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 RAD1O60671 282 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 LRIG2O94898 1065 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 HOXC4P09017 264 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 PRKAR1AP10644 381 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 XPAP23025 273 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ELAVL4P26378 380 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 PON1P27169 355 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CD1CP29017 333 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ALDH4A1P30038 563 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CSF2RBP32927 897 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ADRA1BP35368 520 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 TRIM23P36406 574 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 GPR3P46089 330 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CD97P48960 835 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 MAZP56270 477 aaKnown RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 STX17P56962 302 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 RHOAP61586 193 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 SH3BP2P78314 561 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 ATP11AP98196 1134 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 RAD51Q06609 339 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 PAK1Q13153 545 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 NCAPHQ15003 741 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 CLPPQ16740 277 aaPredicted RBP5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 UGP2Q16851 508 aa5.15□□□□□ -1.59
SNRNP40-204ENST00000474025 AMZ1Q400G9 498 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms