RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 SPC24Q8NBT2 197 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 ZNF548Q8NEK5 533 aaPredicted RBP11.57□□□□□ -0.56
CPNE1-222ENST00000473373 OR4C6Q8NH72 309 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 SCG3Q8WXD2 468 aaKnown RBP11.57□□□□□ -0.56
CPNE1-222ENST00000473373 APOOQ9BUR5 198 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 NLGN3Q9NZ94 848 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 B4GALT6Q9UBX8 382 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 PCDHGA1Q9Y5H4 931 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 RAI2Q9Y5P3 530 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 ITPR1Q14643 2758 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 DMXL2Q8TDJ6 3036 aa11.57□□□□□ -0.56
CPNE1-222ENST00000473373 ANKRD11Q6UB99 2663 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 MACROD2A1Z1Q3 448 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 CPED1A4D0V7 1026 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 FAM221BA6H8Z2 402 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 SOWAHDA6NJG2 315 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TRAFD1O14545 582 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 SCAMP1O15126 338 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 PSTPIP1O43586 416 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 MTA2O94776 668 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 RASGRP1O95267 797 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TNFP01375 233 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 CAPNS1P04632 268 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 C1SP09871 688 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 CES1P23141 567 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 CETN2P41208 172 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 RPIAP49247 311 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ACADVLP49748 655 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TRAF2Q12933 501 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 MTM1Q13496 603 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TFDP2Q14188 446 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 NFATC4Q14934 902 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 PDK1Q15118 436 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 LLGL1Q15334 1064 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ELOCQ15369 112 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 WSCD2Q2TBF2 565 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 HES3Q5TGS1 186 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 RAET1GQ6H3X3 334 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ESRP1Q6NXG1 681 aaKnown RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ZCCHC8Q6NZY4 707 aaKnown RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TXLNBQ8N3L3 684 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 SLC25A45Q8N413 288 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 LPCAT1Q8NF37 534 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TSACCQ96A04 125 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 HDAC11Q96DB2 347 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ECHDC3Q96DC8 303 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 APOLD1Q96LR9 279 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 WDR92Q96MX6 357 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 PANX2Q96RD6 677 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 WDR26Q9H7D7 661 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 TOR4AQ9NXH8 423 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 KCTD5Q9NXV2 234 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 DTLQ9NZJ0 730 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 CHKBQ9Y259 395 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 KNTC1P50748 2209 aa11.56□□□□□ -0.56
CPNE1-222ENST00000473373 ARHGEF17Q96PE2 2063 aaPredicted RBP11.56□□□□□ -0.56
CPNE1-222ENST00000473373 RP1P56715 2156 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CFAP69A5D8W1 941 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 K7ESM1 405 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 KCNK1O00180 336 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 PDE2AO00408 941 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 TRIM38O00635 465 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 NDUFA10O95299 355 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 PGLSO95336 258 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 JCHAINP01591 159 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 HLA-DQB2P05538 268 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 ALPIP09923 528 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CR2P20023 1033 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CTNNA2P26232 953 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 PEX5P50542 639 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 SRP54P61011 504 aaKnown RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 E2F1Q01094 437 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 RALGDSQ12967 914 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 EIF2B5Q13144 721 aaKnown RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 ILKQ13418 452 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 BIRC2Q13490 618 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CNGA3Q16281 694 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CDKN3Q16667 212 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 LRRC38Q5VT99 294 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CCDC70Q6NSX1 233 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 NPNTQ6UXI9 565 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 TMPRSS7Q7RTY8 843 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 TMPRSS12Q86WS5 348 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 GKN2Q86XP6 184 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 PQLC3Q8N755 202 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 TPCN2Q8NHX9 752 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 FAF2Q96CS3 445 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 RBM41Q96IZ5 413 aaKnown RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 TSGA13Q96PP4 275 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 LGMNQ99538 433 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 FERMT1Q9BQL6 677 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CEP41Q9BYV8 373 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 GOLPH3Q9H4A6 298 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 CCDC86Q9H6F5 360 aaKnown RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 PHPT1Q9NRX4 125 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-222ENST00000473373 NCKIPSDQ9NZQ3 722 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 SIRPGQ9P1W8 387 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 GULP1Q9UBP9 304 aa11.55□□□□□ -0.56
CPNE1-222ENST00000473373 AMACRQ9UHK6 382 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms