RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CLDN6P56747 220 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 DSC2Q02487 901 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 DEFB133Q30KQ1 61 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 ENPP7Q6UWV6 458 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 USP45Q70EL2 814 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 LRRN4Q8WUT4 740 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 SCRN2Q96FV2 425 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 COQ10AQ96MF6 247 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 PANX2Q96RD6 677 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 MCCC1Q96RQ3 725 aaPredicted RBP22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 IL12RB2Q99665 862 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 KCTD5Q9NXV2 234 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 SALL4Q9UJQ4 1053 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 PPIL1Q9Y3C6 166 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 HYOU1Q9Y4L1 999 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 HEY1Q9Y5J3 304 aa22.6■■□□□ 1.21
PTP4A1-203ENST00000473334 LY6G6EA0A0G2JKS1 128 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 NPIPB15A6NHN6 443 aaPredicted RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 PSMD11O00231 422 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 FZD6O60353 706 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 GCATO75600 419 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 RASGRP1O95267 797 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 HLA-DQB2P05538 268 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 TNNT1P13805 278 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 JUPP14923 745 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 ZFXP17010 805 aaPredicted RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 HK3P52790 923 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 KIAA1024LP59773 190 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 E2F1Q01094 437 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 PPIDQ08752 370 aaKnown RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 C1orf61Q13536 156 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 CAMK2BQ13554 666 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 SPA17Q15506 151 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 ALG11Q2TAA5 492 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 ESRP1Q6NXG1 681 aaKnown RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 RFX6Q8HWS3 928 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 HID1Q8IV36 788 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 NDUFAF2Q8N183 169 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 TPCN2Q8NHX9 752 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 PIH1D2Q8WWB5 315 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 TSACCQ96A04 125 aaPredicted RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 RNF25Q96BH1 459 aaPredicted RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 NUS1Q96E22 293 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 WDR92Q96MX6 357 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 CCDC86Q9H6F5 360 aaKnown RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 LUC7LQ9NQ29 371 aaKnown RBP22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 NCKIPSDQ9NZQ3 722 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 KLQ9UEF7 1012 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 PCDHA13Q9Y5I0 950 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 U3KQA8 63 aa22.59■■□□□ 1.21
PTP4A1-203ENST00000473334 LMO7DNF2Z398 122 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 CACNB4O00305 520 aaPredicted RBP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 PDHA1P08559 390 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 KRT10P13645 584 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 TSHRP16473 764 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 LHCGRP22888 699 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 INSM1Q01101 510 aaPredicted RBP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 ARHGEF7Q14155 803 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 PNCKQ6P2M8 343 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 FSTL5Q8N475 847 aaPredicted RBP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 PDCD7Q8N8D1 485 aaKnown RBP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 ARRDC2Q8TBH0 407 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 FUBP1Q96AE4 644 aaKnown RBP22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 LGMNQ99538 433 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 CLPBQ9H078 707 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 MYLKQ15746 1914 aa22.58■■□□□ 1.21
PTP4A1-203ENST00000473334 DMXL2Q8TDJ6 3036 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 A0A0A6YYK5 440 aaPredicted RBP22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 TRABD2BA6NFA1 517 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 PSTPIP1O43586 416 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 KRT37O76014 449 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 GP1BAP07359 652 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 ANXA6P08133 673 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 HOXC4P09017 264 aaPredicted RBP22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 MYF5P13349 255 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 CTPS1P17812 591 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 CA4P22748 312 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 KELP23276 732 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 TRIM23P36406 574 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 SRP54P61011 504 aaKnown RBP22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 ELOCQ15369 112 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 DENND2CQ68D51 928 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 MFSD7Q6UXD7 560 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 GAS2L3Q86XJ1 694 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 CBARPQ8N350 705 aaPredicted RBP22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 DTD2Q96FN9 168 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 TDRD1Q9BXT4 1180 aaKnown RBP22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 WDR26Q9H7D7 661 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 ALG6Q9Y672 507 aa22.57■■□□□ 1.2
PTP4A1-203ENST00000473334 KCNK1O00180 336 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 JCHAINP01591 159 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 ALPIP09923 528 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 CTSEP14091 401 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 FECHP22830 423 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 EPHB1P54762 984 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 IFI35P80217 286 aaPredicted RBP22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 NIPAL4Q0D2K0 466 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 IHHQ14623 411 aa22.56■■□□□ 1.2
PTP4A1-203ENST00000473334 PDK1Q15118 436 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms