RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 EBF1Q9UH73 591 aa19.25■□□□□ 0.67
PSPC1-203ENST00000471658 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.25■□□□□ 0.67
PSPC1-203ENST00000471658 ADRA1DP25100 572 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 NMBRP28336 390 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 PXNP49023 591 aaPredicted RBP19.24■□□□□ 0.67
PSPC1-203ENST00000471658 TAS2R38P59533 333 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 BRD3Q15059 726 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 KYNUQ16719 465 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 GLT6D1Q7Z4J2 308 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 NDUFAF2Q8N183 169 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 PPHLN1Q8NEY8 458 aaKnown RBP19.24■□□□□ 0.67
PSPC1-203ENST00000471658 TSTD1Q8NFU3 115 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 FCRL3Q96P31 734 aaPredicted RBP19.24■□□□□ 0.67
PSPC1-203ENST00000471658 OMDQ99983 421 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
PSPC1-203ENST00000471658 BPIFA1Q9NP55 256 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 NINJ2Q9NZG7 142 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 SAMD15Q9P1V8 674 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 SOX13Q9UN79 622 aa19.24■□□□□ 0.67
PSPC1-203ENST00000471658 C1orf232A0A0U1RR37 186 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 CCL22O00626 93 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 AREL1O15033 823 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 C7P10643 843 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 AOC1P19801 751 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 VIPR1P32241 457 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 GPX6P59796 221 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 RALGDSQ12967 914 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 LRRC66Q68CR7 880 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 ESRP1Q6NXG1 681 aaKnown RBP19.23■□□□□ 0.67
PSPC1-203ENST00000471658 RFLNAQ6ZTI6 216 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 FAM124AQ86V42 546 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 OR13C4Q8NGS5 318 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 LRRC39Q96DD0 335 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 MFSD3Q96ES6 412 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 RANBP9Q96S59 729 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 LYSMD1Q96S90 227 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 KIFC1Q9BW19 673 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 GPR63Q9BZJ6 419 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 PHACTR1Q9C0D0 580 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 TSPYL1Q9H0U9 437 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 BCCIPQ9P287 314 aaKnown RBP eCLIP19.23■□□□□ 0.67
PSPC1-203ENST00000471658 ZC3H7BQ9UGR2 993 aaKnown RBP19.23■□□□□ 0.67
PSPC1-203ENST00000471658 FADS3Q9Y5Q0 445 aa19.23■□□□□ 0.67
PSPC1-203ENST00000471658 NCOR1O75376 2440 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 HEATR9A2RTY3 570 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 MROH6A6NGR9 719 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ACADMP11310 421 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 SSTR1P30872 391 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 MMP12P39900 470 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 PMS2P54278 862 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 TMPRSS15P98073 1019 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 PTSQ03393 145 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 SLMAPQ14BN4 828 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 TAF1AQ15573 450 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 SMAD1Q15797 465 aaKnown RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 TSTD2Q5T7W7 516 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ERAP2Q6P179 960 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 UNC5AQ6ZN44 842 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 DPPA4Q7L190 304 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 RELL1Q8IUW5 271 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 CAVIN3Q969G5 261 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 WRAP53Q9BUR4 548 aaKnown RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 LRRC4CQ9HCJ2 640 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 CCDC151A5D8V7 595 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 CYP2A6P11509 494 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 CXCL12P48061 93 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ZBTB16Q05516 673 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 CNGA3Q16281 694 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ANKRD20A4Q4UJ75 823 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 EMBQ6PCB8 327 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 PALM2Q8IXS6 379 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 UNC5BQ8IZJ1 945 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 UHMK1Q8TAS1 419 aaKnown RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ZNF669Q96BR6 464 aaPredicted RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 DNAJC1Q96KC8 554 aaKnown RBP19.22■□□□□ 0.67
PSPC1-203ENST00000471658 TPSD1Q9BZJ3 242 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 EPHX3Q9H6B9 360 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 ZFYVE1Q9HBF4 777 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 IL1RAPL1Q9NZN1 696 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 HACD3Q9P035 362 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 RPS6KL1Q9Y6S9 549 aa19.22■□□□□ 0.67
PSPC1-203ENST00000471658 FAM237BA0A1B0GVD1 139 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 MAGEB16A2A368 324 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 C2orf81A6NN90 581 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 CRTAMO95727 393 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 C1SP09871 688 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 H2AFXP16104 143 aaPredicted RBP19.21■□□□□ 0.67
PSPC1-203ENST00000471658 PGAM1P18669 254 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 TPMTP51580 245 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 ZNF140P52738 457 aaPredicted RBP19.21■□□□□ 0.67
PSPC1-203ENST00000471658 TTC31Q49AM3 519 aaPredicted RBP19.21■□□□□ 0.67
PSPC1-203ENST00000471658 FBXO38Q6PIJ6 1188 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 HSD11B1LQ7Z5J1 315 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 TMEM135Q86UB9 458 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 OR4K2Q8NGD2 314 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 FAM131CQ96AQ9 280 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 EPB41L4BQ9H329 900 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 TRABDQ9H4I3 376 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 ITM2CQ9NQX7 267 aa19.21■□□□□ 0.67
PSPC1-203ENST00000471658 IL17CQ9P0M4 197 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms