RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PGM2L1Q6PCE3 622 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 TMEM207Q6UWW9 146 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 ANKRD33Q7Z3H0 272 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 TMC7Q7Z402 723 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 NET1Q7Z628 596 aaPredicted RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 SCUBE1Q8IWY4 988 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.44□□□□□ -1.38
SPEN-204ENST00000471538 LGI2Q8N0V4 545 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 ARHGAP24Q8N264 748 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 PHTF2Q8N3S3 785 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 CPSF7Q8N684 471 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 GPATCH11Q8N954 259 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 KDM1BQ8NB78 822 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 PDZD8Q8NEN9 1154 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 GPR150Q8NGU9 434 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 KCNV2Q8TDN2 545 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SREK1Q8WXA9 508 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 PLD4Q96BZ4 506 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SCLYQ96I15 445 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 MAELQ96JY0 434 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 CNDP1Q96KN2 507 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 MYRFLQ96LU7 910 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 TSNARE1Q96NA8 513 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 PANX3Q96QZ0 392 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 NDNQ99608 321 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SEMA3CQ99985 751 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 MRPL57Q9BQC6 102 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 CCDC28BQ9BUN5 200 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 POLR1EQ9GZS1 481 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 ILKAPQ9H0C8 392 aaPredicted RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 MAGEH1Q9H213 219 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 MARCH4Q9P2E8 410 aaPredicted RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 HSFX1Q9UBD0 423 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 PRKAG2Q9UGJ0 569 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SLC7A8Q9UHI5 535 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 ZDHHC2Q9UIJ5 367 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 DNMT3LQ9UJW3 386 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 LRRC42Q9Y546 428 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.44□□□□□ -1.38
SPEN-204ENST00000471538 ANKRD36A6QL64 1941 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 ANAPC1Q9H1A4 1944 aa6.44□□□□□ -1.38
SPEN-204ENST00000471538 TRIM43BA6NCK2 446 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 OR51F1A6NGY5 319 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 A8MT66 165 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 MEI4A8MW99 385 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SLCO1B7G3V0H7 640 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 H0Y3Z8 333 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 GFRA2O00451 464 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SLC22A2O15244 555 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 COCHO43405 550 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 KDELR3O43731 214 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 CCNT2O60583 730 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 STC2O76061 302 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ABLIM3O94929 683 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 PARNO95453 639 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 F11P03951 625 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 KLKB1P03952 638 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 JUNP05412 331 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 LTA4HP09960 611 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 SNRPBP14678 240 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 CD1EP15812 388 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 RPL17P18621 184 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 TFEBP19484 476 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ITGAXP20702 1163 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 KCNA5P22460 613 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 FDXRP22570 491 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ATP5F1P24539 256 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 ITGB8P26012 769 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ATP5C1P36542 298 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 ETFBP38117 255 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SLC26A3P40879 764 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 RGRP47804 291 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 PTDSS1P48651 473 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 TUFMP49411 452 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 RPL14P50914 215 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 SGSHP51688 502 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 KPNA2P52292 529 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 COPAP53621 1224 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 CDKN2DP55273 166 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ACTR3P61158 418 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SMAD3P84022 425 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 SLC25A3Q00325 362 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 DSG1Q02413 1049 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ITKQ08881 620 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ILF2Q12905 390 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 KLF10Q13118 480 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 LAMB3Q13751 1172 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 SEMA3AQ14563 771 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 RCN1Q15293 331 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 TRMT5Q32P41 509 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 USP41Q3LFD5 358 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 LSM12Q3MHD2 195 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 SEL1L3Q68CR1 1132 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 FAM45BPQ6NSW5 357 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 ZNF549Q6P9A3 640 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.43□□□□□ -1.38
SPEN-204ENST00000471538 CHST9Q7L1S5 443 aa6.43□□□□□ -1.38
SPEN-204ENST00000471538 PIWIL4Q7Z3Z4 852 aaKnown RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 MYLK4Q86YV6 388 aaPredicted RBP6.43□□□□□ -1.38
SPEN-204ENST00000471538 CFAP52Q8N1V2 620 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms