RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 HPS4Q9NQG7 708 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 SNX15Q9NRS6 342 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 SLC17A7Q9P2U7 560 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 HECAQ9UBI9 543 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 FBXO5Q9UKT4 447 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 CORO1CQ9ULV4 474 aaPredicted RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 SLC8A2Q9UPR5 921 aa9.41□□□□□ -0.9
VPS52-216ENST00000471309 MTO1Q9Y2Z2 717 aaKnown RBP9.41□□□□□ -0.9
VPS52-216ENST00000471309 MYO7AQ13402 2215 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 FAM95CA0A1B0GW59 222 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 TSPAN11A1L157 253 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CCDC162PA2VCL2 907 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 OTOL1A6NHN0 477 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 H7C0S8 307 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CCL22O00626 93 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 AURKAO14965 403 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 TRIM24O15164 1050 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CD3EAPO15446 510 aaKnown RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 ECI2O75521 394 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 GOT2P00505 430 aaKnown RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 AHSGP02765 367 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 GSTA1P08263 222 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 LAMP2P13473 410 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PSMC3P17980 439 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 GKP32189 559 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 HMGCLP35914 325 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 EIF2DP41214 584 aaKnown RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 ABL2P42684 1182 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 RECQLP46063 649 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 CLCN5P51795 746 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 STC1P52823 247 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 SEC24CP53992 1094 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 RAD51Q06609 339 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 DLX2Q07687 328 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 CTBP1Q13363 440 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PTPRCAPQ14761 206 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 ZKSCAN8Q15776 578 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 DBN1Q16643 649 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PTPRNQ16849 979 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 INSCQ1MX18 579 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 TYSND1Q2T9J0 566 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 ACCSLQ4AC99 568 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 MRNIPQ6NTE8 343 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 DPY19L3Q6ZPD9 716 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PTAR1Q7Z6K3 402 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 CLEC14AQ86T13 490 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 TAX1BP1Q86VP1 789 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 YAF2Q8IY57 180 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 OTUD6BQ8N6M0 293 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 OR4K2Q8NGD2 314 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 OR2A12Q8NGT7 310 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 OR4L1Q8NH43 312 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 BCAS4Q8TDM0 211 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 ATXN7L3BQ96GX2 97 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 LRIG1Q96JA1 1093 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 MSLNLQ96KJ4 702 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 TBATAQ96M53 351 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 NECTIN4Q96NY8 510 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 FAM111AQ96PZ2 611 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 MCCC1Q96RQ3 725 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 LYSMD1Q96S90 227 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CIPCQ9C0C6 399 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 VPS11Q9H270 941 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 SUV39H2Q9H5I1 410 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 ZDHHC6Q9H6R6 413 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CATSPERZQ9NTU4 200 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 INTS10Q9NVR2 710 aaKnown RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 CLDND1Q9NY35 253 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 MARCH4Q9P2E8 410 aaPredicted RBP9.4□□□□□ -0.9
VPS52-216ENST00000471309 DEC1Q9P2X7 70 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 DCDC2Q9UHG0 476 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 SLCO3A1Q9UIG8 710 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 GRID1Q9ULK0 1009 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 ANKRD6Q9Y2G4 727 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 PLLPQ9Y342 182 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 MTCH2Q9Y6C9 303 aa9.4□□□□□ -0.9
VPS52-216ENST00000471309 A0A096LPK6 155 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 OR51F1A6NGY5 319 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 NDUFAB1O14561 156 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 STX7O15400 261 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 BUD23O43709 281 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 HAUS5O94927 633 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 S1PR4O95977 384 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 F7P08709 466 aaPredicted RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 ALPIP09923 528 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 STMN1P16949 149 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 CTPS1P17812 591 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 LTBRP36941 435 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 ABCG1P45844 678 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SERPINB4P48594 390 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 ST8SIA6P61647 398 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 TMPRSS15P98073 1019 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 POU4F1Q01851 419 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 KDSRQ06136 332 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms