RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 H2AFVQ71UI9 128 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 DPPA4Q7L190 304 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 OR8K1Q8NGG5 319 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 WDR48Q8TAF3 677 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ZNF564Q8TBZ8 553 aaPredicted RBP13.56□□□□□ -0.24
HMGN1-211ENST00000471260 IFI44Q8TCB0 444 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 SCG3Q8WXD2 468 aaKnown RBP13.56□□□□□ -0.24
HMGN1-211ENST00000471260 NAT6Q93015 286 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 BTBD6Q96KE9 485 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 DEPDC7Q96QD5 511 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 MGME1Q9BQP7 344 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 LRRC61Q9BV99 259 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 ETNK2Q9NVF9 386 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 HAUS2Q9NVX0 235 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 COQ6Q9Y2Z9 468 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 AK5Q9Y6K8 562 aa13.56□□□□□ -0.24
HMGN1-211ENST00000471260 MYLKQ15746 1914 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ANKRD11Q6UB99 2663 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 GCATO75600 419 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 RECQL5O94762 991 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 URI1O94763 535 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 RASGRP1O95267 797 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 KRT7P08729 469 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 KELP23276 732 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 IL4RP24394 825 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 TRIM23P36406 574 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ADKP55263 362 aaKnown RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 CLDN6P56747 220 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 GNG11P61952 73 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 RALGDSQ12967 914 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 PDK2Q15119 407 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 DEFB133Q30KQ1 61 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 TXNRD3NBQ6F5E7 133 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 TIGD7Q6NT04 549 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ESRP1Q6NXG1 681 aaKnown RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ENPP7Q6UWV6 458 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 MAP7D3Q8IWC1 876 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 TP53INP2Q8IXH6 220 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 RBFAQ8N0V3 343 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 LSMEM2Q8N112 164 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 CEP112Q8N8E3 955 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 MAPK15Q8TD08 544 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 CTNNBL1Q8WYA6 563 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 FATE1Q969F0 183 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 DNAJC7Q99615 494 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ZNF670Q9BS34 389 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 TCEAL2Q9H3H9 227 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ZNHIT6Q9NWK9 470 aaKnown RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 AMACRQ9UHK6 382 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 PNMA8BQ9ULN7 279 aaPredicted RBP13.55□□□□□ -0.24
HMGN1-211ENST00000471260 PHTF1Q9UMS5 762 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 DOLKQ9UPQ8 538 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ADGRG1Q9Y653 693 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 DGKBQ9Y6T7 804 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 ZZEF1O43149 2961 aa13.55□□□□□ -0.24
HMGN1-211ENST00000471260 CHD6Q8TD26 2715 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PSMD11O00231 422 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CACNB4O00305 520 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PDE2AO00408 941 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 TNFRSF10CO14798 259 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 YY2O15391 372 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 TCEA3O75764 348 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PROSCO94903 275 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CTSEP14091 401 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 TSHRP16473 764 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CES1P23141 567 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 SSR1P43307 286 aaKnown RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 MMP13P45452 471 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 ARSEP51690 589 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 KIAA1024LP59773 190 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 SRP54P61011 504 aaKnown RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CBX1P83916 185 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 C1orf61Q13536 156 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CDKN3Q16667 212 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 KDM7AQ6ZMT4 941 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 GKN2Q86XP6 184 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 NDUFAF2Q8N183 169 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 OR6C4Q8NGE1 309 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 SNIP1Q8TAD8 396 aaKnown RBP13.54□□□□□ -0.24
HMGN1-211ENST00000471260 WDR92Q96MX6 357 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CLPBQ9H078 707 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 DEF6Q9H4E7 631 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CAAP1Q9H8G2 361 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 ABHD10Q9NUJ1 306 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CTTNBP2NLQ9P2B4 639 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 KLQ9UEF7 1012 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PPIL1Q9Y3C6 166 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 PCDHGC4Q9Y5F7 938 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 ANKRD36A6QL64 1941 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 LRRK1Q38SD2 2015 aa13.54□□□□□ -0.24
HMGN1-211ENST00000471260 CELSR3Q9NYQ7 3312 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 ADAMTS20P59510 1910 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 CPED1A4D0V7 1026 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 TNFP01375 233 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 PRKCGP05129 697 aa13.53□□□□□ -0.24
HMGN1-211ENST00000471260 PCCBP05166 539 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms